RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SPAG4Q9NPE6 437 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 PNPLA3Q9NST1 481 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 CD300AQ9UGN4 299 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 TRHDEQ9UKU6 1024 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 DERAQ9Y315 318 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 FAM149AA5PLN7 773 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 H0YJX3 145 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 MRASO14807 208 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 ZSCAN9O15535 394 aaPredicted RBP14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 AKAP10O43572 662 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 NPHS1O60500 1241 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 GPC4O75487 556 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 HNRNPCP07910 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 CYP2C9P11712 490 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 COL6A2P12110 1019 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 NPR3P17342 541 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 ETFBP38117 255 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 GRIA3P42263 894 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 SLC1A2P43004 574 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 PSMD8P48556 350 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 SLC7A2P52569 658 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 NME5P56597 212 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 PLOD1Q02809 727 aaPredicted RBP14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 MFSD10Q14728 455 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 DCAF4L1Q3SXM0 396 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 SLC27A1Q6PCB7 646 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 CLVS1Q8IUQ0 354 aaPredicted RBP14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 EDEM1Q92611 657 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 PHF21BQ96EK2 531 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 MED10Q9BTT4 135 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 ATXN3LQ9H3M9 355 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 CLK4Q9HAZ1 481 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 DDIT4Q9NX09 232 aa14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 FAF1Q9UNN5 650 aaPredicted RBP14.21□□□□□ -0.13
CLCNKA-202ENST00000375692 SMIM28A0A1B0GU29 152 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 SEC24DO94855 1032 aaPredicted RBP14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 SNRPB2P08579 225 aaKnown RBP14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 NCAM1P13591 858 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 GALNT2Q10471 571 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF789Q5FWF6 425 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 RBM20Q5T481 1227 aaKnown RBP14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 CLEC6AQ6EIG7 209 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 NAPEPLDQ6IQ20 393 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 ALKAL1Q6UXT8 129 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 CLEC20AQ6ZU45 233 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 PIWIL4Q7Z3Z4 852 aaKnown RBP14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 KLHL23Q8NBE8 558 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 HDAC11Q96DB2 347 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF419Q96HQ0 510 aaPredicted RBP14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 HNRNPABQ99729 332 aaKnown RBP14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 IPO11Q9UI26 975 aaKnown RBP14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 FBXW11Q9UKB1 542 aa14.21□□□□□ -0.14
CLCNKA-202ENST00000375692 TREHO43280 583 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 TPST1O60507 370 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 ATP6V1B2P21281 511 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 ARCN1P48444 511 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 CPT1AP50416 773 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 PURAQ00577 322 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 GPRIN1Q7Z2K8 1008 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF786Q8N393 782 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 MRPL57Q9BQC6 102 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 ANKRD60Q9BZ19 345 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 NSMCE4AQ9NXX6 385 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 CACNG4Q9UBN1 327 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 CROTQ9UKG9 612 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 AURKCQ9UQB9 309 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF510Q9Y2H8 683 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 NCAM2O15394 837 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 HUS1O60921 280 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 DUSP11O75319 330 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 USP17L7P0C7H9 530 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 ATP5F1P24539 256 aaPredicted RBP14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 PSEN2P49810 448 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 TRAP1Q12931 704 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 SQLEQ14534 574 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 PRPSAP1Q14558 356 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 C16orf72Q14CZ0 275 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 ANKDD1AQ495B1 522 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 PCID2Q5JVF3 399 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 KIAA0319Q5VV43 1072 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF470Q6ECI4 717 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 CUZD1Q86UP6 607 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 DHFR2Q86XF0 187 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 CBR4Q8N4T8 237 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 FNDC8Q8TC99 324 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 LZICQ8WZA0 190 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 TFAP2CQ92754 450 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 TNIP3Q96KP6 325 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 OSMRQ99650 979 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 IGSF5Q9NSI5 407 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 TMEM181Q9P2C4 612 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 OR12D3Q9UGF7 316 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 SRRDQ9UH36 339 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 SARDHQ9UL12 918 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 UBQLN1Q9UMX0 589 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 CDC14AQ9UNH5 594 aa14.2□□□□□ -0.14
CLCNKA-202ENST00000375692 C9JVG2 144 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 DFFAO00273 331 aa14.19□□□□□ -0.14
CLCNKA-202ENST00000375692 NRP2O60462 931 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms