RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SLC25A51Q9H1U9 297 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 ZFYVE1Q9HBF4 777 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 PDLIM7Q9NR12 457 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 SLC17A6Q9P2U8 582 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 DEC1Q9P2X7 70 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 MFHAS1Q9Y4C4 1052 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 KDM1AO60341 852 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 SLC25A14O95258 325 aaPredicted RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 HSPA1AP0DMV8 641 aaKnown RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 HSPA1BP0DMV9 641 aaKnown RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 PSMA4P25789 261 aaKnown RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 NMUR1Q9HB89 426 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 ZNF682O95780 498 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 DLG2Q15700 870 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 CPSF6Q16630 551 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 FBXL22Q6P050 247 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 DRICH1Q6PGQ1 229 aaPredicted RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 SELENOMQ8WWX9 145 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 LINGO1Q96FE5 620 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 COPS7BQ9H9Q2 264 aaPredicted RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 TMEM114B3SHH9 223 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 UGT1A9O60656 530 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 ALDH1A2O94788 518 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 ANXA5P08758 320 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 PRKAA2P54646 552 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 OLIG2Q13516 323 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 MPPE1Q53F39 396 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 ATXN7L2Q5T6C5 722 aaPredicted RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 ZSCAN18Q8TBC5 510 aaPredicted RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 NXNL1Q96CM4 212 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 CCDC134Q9H6E4 229 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 UGT1A7Q9HAW7 530 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 UGT1A10Q9HAW8 530 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 UGT1A8Q9HAW9 530 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 MIEF1Q9NQG6 463 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 ZDHHC18Q9NUE0 388 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 CROTQ9UKG9 612 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 DTNAQ9Y4J8 743 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 BEST1O76090 585 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 LRRC73Q5JTD7 316 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 PIWIL4Q7Z3Z4 852 aaKnown RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 WDTC1Q8N5D0 677 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 MYO19Q96H55 970 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 DNAJC1Q96KC8 554 aaKnown RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 MRPL57Q9BQC6 102 aaKnown RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 WDR55Q9H6Y2 383 aaPredicted RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 ZFP14Q9HCL3 533 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 GIMAP4Q9NUV9 329 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 RABGEF1Q9UJ41 708 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 GLI3P10071 1580 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 EDF1O60869 148 aaKnown RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 CLTBP09497 229 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 APLP1P51693 650 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 SLC25A11Q02978 314 aaKnown RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 CHRNB3Q05901 458 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 PPIGQ13427 754 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 MFSD5Q6N075 450 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 ALYREFQ86V81 257 aaKnown RBP18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 MPP5Q8N3R9 675 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 CAAP1Q9H8G2 361 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 FLRT1Q9NZU1 646 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 NHSL1Q5SYE7 1610 aa18.05■□□□□ 0.48
PTPDC1-202ENST00000375360 KCNJ2P63252 427 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 MSLNQ13421 630 aaPredicted RBP18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 DMC1Q14565 340 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 FAM124AQ86V42 546 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 SMG8Q8ND04 991 aaKnown RBP18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 FAM120BQ96EK7 910 aaKnown RBP18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 PEBP4Q96S96 227 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 PLLPQ9Y342 182 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 COL2A1P02458 1487 aaPredicted RBP18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 PLCH1Q4KWH8 1693 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 HDAC3O15379 428 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 HNF4AP41235 474 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 SFSWAPQ12872 951 aaKnown RBP18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 UBAP2LQ14157 1087 aaKnown RBP18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 NCBP2-AS2Q69YL0 99 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 ZNF614Q8N883 585 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 CXorf40AQ8TE69 158 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 ACAT2Q9BWD1 397 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 SLX4Q8IY92 1834 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 PSMD12O00232 456 aaPredicted RBP18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 GPR32O75388 356 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 THOP1P52888 689 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 SLC10A7Q0GE19 358 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 MFSD4BQ5TF39 518 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 HORMAD1Q86X24 394 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 DLGAP2Q9P1A6 1054 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 BPGMP07738 259 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 ZCCHC18P0CG32 403 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 ZNF460Q14592 562 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 RMND5AQ9H871 391 aa18.04■□□□□ 0.48
PTPDC1-202ENST00000375360 GABRB2P47870 512 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 ACSM2AQ08AH3 577 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 ACSM2BQ68CK6 577 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 CAPRIN2Q6IMN6 1127 aaKnown RBP18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 TMEM154Q6P9G4 183 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 ADGRD1Q6QNK2 874 aa18.03■□□□□ 0.48
PTPDC1-202ENST00000375360 ZNF398Q8TD17 642 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms