RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ADI1Q9BV57 179 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 OXCT2Q9BYC2 517 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 RBM22Q9NW64 420 aaKnown RBP eCLIP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 NOS3P29474 1203 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 STARP49675 285 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 TCEA2Q15560 299 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 OR2T12Q8NG77 320 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 SH2D3AQ9BRG2 576 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 EPB41L1Q9H4G0 881 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 TRNAU1APQ9NX07 287 aaKnown RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 PIGBOS1A0A0B4J2F0 54 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 PROZP22891 400 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 ATP13A4Q4VNC1 1196 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 HEATR4Q86WZ0 1026 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF512Q96ME7 567 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 NLNQ9BYT8 704 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 NMUR2Q9GZQ4 415 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 TDRD3Q9H7E2 651 aaKnown RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 MRPS14O60783 128 aaKnown RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 HOXC8P31273 242 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 FMO1Q01740 532 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 SHQ1Q6PI26 577 aaKnown RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 FICDQ9BVA6 458 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF232Q9UNY5 417 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 SMIM22K7EJ46 135 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 GNB5O14775 395 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 MMP8P22894 467 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 HSF2Q03933 536 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 PGS1Q32NB8 556 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 FAXCQ5TGI0 409 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 TAMM41Q96BW9 452 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 AURKBQ96GD4 344 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 SLC9A7Q96T83 725 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 FTH1P02794 183 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 RPLP0P05388 317 aaKnown RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 MSL3P1P0C860 447 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 CSH1P0DML2 217 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 CSH2P0DML3 217 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 GSTCDQ8NEC7 633 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 TRAF6Q9Y4K3 522 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 BCL9LQ86UU0 1499 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 NOMO3P69849 1222 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 KCTD21Q4G0X4 260 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 KAT8Q9H7Z6 458 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SH3BP1Q9Y3L3 701 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 MYPNQ86TC9 1320 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF487B1APH4 448 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 GCATO75600 419 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 IFNA16P05015 189 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 FYNP06241 537 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CAP2P40123 477 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 LIMK2P53671 638 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 C6orf89Q6UWU4 347 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SLC26A9Q7LBE3 791 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ARL10Q8N8L6 244 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 FAIM2Q9BWQ8 316 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 IL1RAPQ9NPH3 570 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 PXMP2Q9NR77 195 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 A0A0X1KG70 313 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 DDX3YO15523 660 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ATP6V1G1O75348 118 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 JCHAINP01591 159 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ACADLP28330 430 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ALDH6A1Q02252 535 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 FSTL1Q12841 308 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 RNASEH2BQ5TBB1 312 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ZYG11AQ6WRX3 759 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 BPIFB6Q8NFQ5 453 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 RTFDC1Q9BY42 306 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SCAF8Q9UPN6 1271 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 REXO2Q9Y3B8 237 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 V9GYQ6 96 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF33AQ06730 810 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ARHGAP15Q53QZ3 475 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 KAT5Q92993 513 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF317Q96PQ6 595 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SLC22A4Q9H015 551 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CAB39LQ9H9S4 337 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 EMC3Q9P0I2 261 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 PCDHB1Q9Y5F3 818 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ST14Q9Y5Y6 855 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 A0A087X0B3 334 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 A0A1W2PRG6 482 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 GRAP2O75791 330 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 GSTT2BP0CG30 244 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 PORP16435 677 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 AVPR1AP37288 418 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 KLF10Q13118 480 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CYP2A13Q16696 494 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 C16orf46Q6P387 395 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 RNPEPQ9H4A4 650 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 FBXO6Q9NRD1 293 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 MED11Q9P086 117 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 UXTQ9UBK9 157 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CLCA2Q9UQC9 943 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 POMPQ9Y244 141 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 RFTN1Q14699 578 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 PGM5Q15124 567 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms