RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 AGPSO00116 658 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SHOXO15266 292 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 PROM1O43490 865 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 TBX10O75333 385 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 PGLSO95336 258 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 F9P00740 461 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 MAGEA12P43365 314 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 RPS8P62241 208 aaKnown RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 RBP5P82980 135 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SSX9Q7RTT3 188 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 NT5DC3Q86UY8 548 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 QRFPRQ96P65 431 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 IL22Q9GZX6 179 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 DNTTIP1Q9H147 329 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 CCDC86Q9H6F5 360 aaKnown RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 ZMYM4Q5VZL5 1548 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SCGNO76038 276 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 CHRNB1P11230 501 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 RPP38P78345 283 aaKnown RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 SLC13A2Q13183 592 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 TRIM28Q13263 835 aaKnown RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 FOXP4Q8IVH2 680 aaPredicted RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 GLT1D1Q96MS3 346 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 TCF7L1Q9HCS4 588 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 RAB3BP20337 219 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 ALDH3B2P48448 385 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 VEGFCP49767 419 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SEMA3AQ14563 771 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.65□□□□□ -1.34
UBR4-204ENST00000375254 CYP2R1Q6VVX0 501 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SGTBQ96EQ0 304 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 KCNN3Q9UGI6 736 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 RNF112Q9ULX5 631 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SSX4O60224 188 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 FXR2P51116 673 aaKnown RBP eCLIP6.65□□□□□ -1.357e-9■■■■□ 21.9
UBR4-204ENST00000375254 SLC30A10Q6XR72 485 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 SSX6Q7RTT6 188 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 OR10T2Q8NGX3 314 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 PCDH19Q8TAB3 1148 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 NSUN6Q8TEA1 469 aaKnown RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 RAD51AP1Q96B01 352 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 C10orf90Q96M02 699 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 NUFIP1Q9UHK0 495 aaKnown RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 SAMD4AQ9UPU9 718 aaKnown RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 DHRS7Q9Y394 339 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 C9orf84Q5VXU9 1444 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 H7C1W4 665 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 C6orf222P0C671 652 aaPredicted RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 RGS19P49795 217 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 ZNF470Q6ECI4 717 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 SLC25A25Q6KCM7 469 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 KLHL24Q6TFL4 600 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 OAFQ86UD1 273 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 FNDC5Q8NAU1 212 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 TMED9Q9BVK6 235 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 LATS2Q9NRM7 1088 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 SLC22A3O75751 556 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 SCELO95171 688 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 AIMP2Q13155 320 aaKnown RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 PON2Q15165 354 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 CPNE9Q8IYJ1 553 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 ZYG11BQ9C0D3 744 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 DISC1C4P0D8 188 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 SUV39H1O43463 412 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 TNNI3P19429 210 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 SLC30A8Q8IWU4 369 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 OFCC1Q8IZS5 231 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 RASGEF1CQ8N431 466 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 NFATC2IPQ8NCF5 419 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 TSNAXQ99598 290 aaKnown RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 TBCDQ9BTW9 1192 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 PNPLA7Q6ZV29 1317 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 ANXA3P12429 323 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 TGM3Q08188 693 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 KIZQ2M2Z5 673 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 REPS2Q8NFH8 660 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 PTCD2Q8WV60 388 aaKnown RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 FAM83DQ9H4H8 585 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 GAREM1Q9H706 876 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 ELAC1Q9H777 363 aaKnown RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 HSPE1-MOB4S4R3N1 261 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 OPLAHO14841 1288 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 UCHL1P09936 223 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 IL4RP24394 825 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 FAAP100Q0VG06 881 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 QPCTQ16769 361 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 TPRG1LQ5T0D9 272 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 G2E3Q7L622 706 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 ZNF598Q86UK7 904 aaKnown RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.35
UBR4-204ENST00000375254 CBR4Q8N4T8 237 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 CKLFQ9UBR5 152 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 DLGAP4Q9Y2H0 992 aa6.65□□□□□ -1.35
UBR4-204ENST00000375254 CSPG5O95196 566 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 STK11Q15831 433 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 EXT2Q93063 718 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 C12orf43Q96C57 262 aaKnown RBP6.64□□□□□ -1.35
UBR4-204ENST00000375254 SCRN2Q96FV2 425 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 CNDP2Q96KP4 475 aaKnown RBP6.64□□□□□ -1.35
UBR4-204ENST00000375254 TESMINQ9Y4I5 508 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms