RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 NCKAP1Q9Y2A7 1128 aa9.21□□□□□ -0.94
PTPN20-201ENST00000374218 MTF2Q9Y483 593 aaPredicted RBP9.21□□□□□ -0.94
PTPN20-201ENST00000374218 NYNRINQ9P2P1 1898 aaKnown RBP9.2□□□□□ -0.94
PTPN20-201ENST00000374218 TCRBV7S3A2A0A539 114 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 TRAFD1O14545 582 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-201ENST00000374218 FZD6O60353 706 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 SLC8A1P32418 973 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 PSMD8P48556 350 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 SESN2P58004 480 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-201ENST00000374218 PDE1BQ01064 536 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 TRADDQ15628 312 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 BBS9Q3SYG4 887 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 SIRPB2Q5JXA9 342 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 CASC4Q6P4E1 433 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 ZDHHC24Q6UX98 284 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 NLRP9Q7RTR0 991 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 CCDC25Q86WR0 208 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 ZNF687Q8N1G0 1237 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 RAB7BQ96AH8 199 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 ECHDC3Q96DC8 303 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 SIPA1Q96FS4 1042 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 OMDQ99983 421 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 EPC1Q9H2F5 836 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 CHRDQ9H2X0 955 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 ZDHHC18Q9NUE0 388 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 RAB21Q9UL25 225 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 C16orf96A6NNT2 1141 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 CRTAMO95727 393 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 CYP2A6P11509 494 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-201ENST00000374218 NEK3P51956 506 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 GABPB1Q06547 395 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-201ENST00000374218 ELP6Q0PNE2 266 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 GALNT3Q14435 633 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 BRD3Q15059 726 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 UGP2Q16851 508 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 Q6ZS52 159 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 KBTBD6Q86V97 674 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 PGBD3Q8N328 593 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 PPHLN1Q8NEY8 458 aaKnown RBP9.2□□□□□ -0.94
PTPN20-201ENST00000374218 TSTD1Q8NFU3 115 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 PTCD2Q8WV60 388 aaKnown RBP9.2□□□□□ -0.94
PTPN20-201ENST00000374218 TRIB3Q96RU7 358 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 HDAC8Q9BY41 377 aa9.2□□□□□ -0.94
PTPN20-201ENST00000374218 BCCIPQ9P287 314 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPN20-201ENST00000374218 A0A1W2PQF6 199 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 TSPAN11A1L157 253 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 HEATR9A2RTY3 570 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 C2orf81A6NN90 581 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 UPK3BL1B0FP48 263 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 UPK3BL2E5RIL1 263 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 NEMP1O14524 444 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 CTSLP07711 333 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 PDHA1P08559 390 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 ADRA1DP25100 572 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 VSNL1P62760 191 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 PDIA2Q13087 525 aaKnown RBP9.19□□□□□ -0.94
PTPN20-201ENST00000374218 EMBQ6PCB8 327 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 ERN2Q76MJ5 926 aaKnown RBP9.19□□□□□ -0.94
PTPN20-201ENST00000374218 CAND1Q86VP6 1230 aaKnown RBP9.19□□□□□ -0.94
PTPN20-201ENST00000374218 BRSK1Q8TDC3 778 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 PYROXD1Q8WU10 500 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 PIH1D2Q8WWB5 315 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 SCRN2Q96FV2 425 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 MAGEE1Q9HCI5 957 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 MAD1L1Q9Y6D9 718 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 COL4A3Q01955 1670 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 A0A0J9YYE9 177 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 TCRBV21S2A2A0A5A6 115 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 PRLP01236 227 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 TRBC1P01850 177 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 ATXN1LP0C7T5 689 aaKnown RBP9.19□□□□□ -0.94
PTPN20-201ENST00000374218 CHRM1P11229 460 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-201ENST00000374218 GRIA1P42261 906 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 CHRNA4P43681 627 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 RPS14P62263 151 aaKnown RBP9.19□□□□□ -0.94
PTPN20-201ENST00000374218 ARHGEF7Q14155 803 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 QPCTQ16769 361 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 PCID2Q5JVF3 399 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 KIAA1211LQ6NV74 962 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 BLOC1S5Q8TDH9 187 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 SAYSD1Q9NPB0 183 aa9.19□□□□□ -0.94
PTPN20-201ENST00000374218 CCDC151A5D8V7 595 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 ANTXRLA6NF34 631 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 RNASEH2AO75792 299 aaKnown RBP9.18□□□□□ -0.94
PTPN20-201ENST00000374218 TTC4O95801 387 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 TPH1P17752 444 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 CXCL12P48061 93 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 CCR3P51677 355 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 CLCN5P51795 746 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 FAM193AP78312 1265 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 IHHQ14623 411 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 POM121L1PQ3SYA9 428 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 CCDC38Q502W7 563 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 DENND5AQ6IQ26 1287 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 KIAA1324Q6UXG2 1013 aaKnown RBP9.18□□□□□ -0.94
PTPN20-201ENST00000374218 USP30Q70CQ3 517 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 PALM2Q8IXS6 379 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 ZBED8Q8IZ13 594 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 HDDC3Q8N4P3 179 aa9.18□□□□□ -0.94
PTPN20-201ENST00000374218 CAMKK1Q8N5S9 505 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms