RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 PDZD8Q8NEN9 1154 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 GATA6Q92908 595 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 CDK5RAP1Q96SZ6 601 aaKnown RBP20.23■□□□□ 0.83
SRSF4-201ENST00000373795 SEMA3CQ99985 751 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 ARNT2Q9HBZ2 717 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 PCDHB12Q9Y5F1 795 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 PHGDHO43175 533 aaKnown RBP20.23■□□□□ 0.83
SRSF4-201ENST00000373795 TSPAN3O60637 253 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 CORO1AP31146 461 aaKnown RBP20.23■□□□□ 0.83
SRSF4-201ENST00000373795 SLC11A2P49281 568 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 SERPINH1P50454 418 aaKnown RBP20.23■□□□□ 0.83
SRSF4-201ENST00000373795 LRRC26Q2I0M4 334 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 SLC9B1Q4ZJI4 515 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 RNF220Q5VTB9 566 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 C1orf53Q5VUE5 145 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 RAPH1Q70E73 1250 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 MFSD6LQ8IWD5 586 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 PRICKLE1Q96MT3 831 aaPredicted RBP20.23■□□□□ 0.83
SRSF4-201ENST00000373795 SPON2Q9BUD6 331 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 S100A14Q9HCY8 104 aa20.23■□□□□ 0.83
SRSF4-201ENST00000373795 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 E9PBE3 544 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 H3BNC9 293 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CCL22O00626 93 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 KLHL41O60662 606 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 HSPA4LO95757 839 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 UBTFL6P0CB48 400 aaPredicted RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 SLC1A2P43004 574 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 TWF1Q12792 350 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 C5orf22Q49AR2 442 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 SIRPB2Q5JXA9 342 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 NAIF1Q69YI7 327 aaPredicted RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 IL31Q6EBC2 164 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 FRMD7Q6ZUT3 714 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CLEC14AQ86T13 490 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 SLC41A1Q8IVJ1 513 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CCDC117Q8IWD4 279 aaPredicted RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 MAPK15Q8TD08 544 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 PAWRQ96IZ0 340 aaKnown RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 GPR22Q99680 433 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 ECSITQ9BQ95 431 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 RHOJQ9H4E5 214 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 FAM96AQ9H5X1 160 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 VPS45Q9NRW7 570 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 SMPD4Q9NXE4 827 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CPSF2Q9P2I0 782 aaKnown RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CHD5Q8TDI0 1954 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 PRRG1O14668 218 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 AURKAO14965 403 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 ZBTB14O43829 449 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CCNT2O60583 730 aaKnown RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 FKBP6O75344 327 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 MPOP05164 745 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 ITGAXP20702 1163 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 GNA12Q03113 381 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 ZNF460Q14592 562 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 USP10Q14694 798 aaKnown RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 RNF111Q6ZNA4 994 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CNTN4Q8IWV2 1026 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 DEFB107AQ8IZN7 70 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 OVCA2Q8WZ82 227 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CMTM5Q96DZ9 223 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 MYRFLQ96LU7 910 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CDH19Q9H159 772 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 RC3H2Q9HBD1 1191 aaKnown RBP20.22■□□□□ 0.83
SRSF4-201ENST00000373795 PDFQ9HBH1 243 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 CDH22Q9UJ99 828 aa20.22■□□□□ 0.83
SRSF4-201ENST00000373795 ANAPC1Q9H1A4 1944 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 CCDC189A1A4V9 331 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 TRIM43BA6NCK2 446 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 BUD23O43709 281 aaKnown RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 MYL4P12829 197 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 CD1EP15812 388 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 CDC16Q13042 620 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 CUL3Q13618 768 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 CCNIQ14094 377 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 CFAP157Q5JU67 520 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 ACBD5Q5T8D3 534 aaPredicted RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 TPGS2Q68CL5 300 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 ZNF470Q6ECI4 717 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 EPGNQ6UW88 154 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 C16orf59Q7L2K0 433 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 DNAJB7Q7Z6W7 309 aaPredicted RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 SLC26A7Q8TE54 656 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 PTCD2Q8WV60 388 aaKnown RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 TRIM43Q96BQ3 446 aaPredicted RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 DDX50Q9BQ39 737 aaKnown RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 MRM3Q9HC36 420 aaKnown RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 AGO1Q9UL18 857 aaKnown RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 KCTD3Q9Y597 815 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 HOXD9P28356 352 aaPredicted RBP20.21■□□□□ 0.83
SRSF4-201ENST00000373795 LRRC36Q1X8D7 754 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 ZNF789Q5FWF6 425 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 PGM2L1Q6PCE3 622 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 KLHDC10Q6PID8 442 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 TMEM150AQ86TG1 271 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 CEP97Q8IW35 865 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 HIPK4Q8NE63 616 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 ACTRT2Q8TDY3 377 aa20.21■□□□□ 0.83
SRSF4-201ENST00000373795 TADA1Q96BN2 335 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms