RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 RAVER1Q8IY67 606 aaKnown RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 SLC39A11Q8N1S5 342 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 NKAPQ8N5F7 415 aaKnown RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 HJURPQ8NCD3 748 aaPredicted RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 SPATA22Q8NHS9 363 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 RFWD2Q8NHY2 731 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 PSMG2Q969U7 264 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 RSRC1Q96IZ7 334 aaKnown RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 CYP2S1Q96SQ9 504 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 AGAP2Q99490 1192 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 C1QTNF1Q9BXJ1 281 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 CCDC68Q9H2F9 335 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 TFB2MQ9H5Q4 396 aaKnown RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 RNPEPL1Q9HAU8 725 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 GPAMQ9HCL2 828 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 NT5MQ9NPB1 228 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 MRPL17Q9NRX2 175 aaKnown RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 NLE1Q9NVX2 485 aaPredicted RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 TAS2R1Q9NYW7 299 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 MPP6Q9NZW5 540 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 VPS28Q9UK41 221 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 PRPF19Q9UMS4 504 aaKnown RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 RUVBL2Q9Y230 463 aaKnown RBP8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 DNAJC16Q9Y2G8 782 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 RWDD3Q9Y3V2 267 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 TRIM17Q9Y577 477 aa8.77□□□□□ -1.01
SNRNP40-202ENST00000373720 INSIG1O15503 277 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 B4GALT3O60512 393 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 SOCS5O75159 536 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 SMIM24O75264 130 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 IPO13O94829 963 aaKnown RBP8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 OLFM2O95897 454 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 MMP2P08253 660 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 FGF4P08620 206 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 HMGA1P17096 107 aaKnown RBP8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 ATF6P18850 670 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 TFEBP19484 476 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 IMPDH1P20839 514 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 CDC25CP30307 473 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 CD86P42081 329 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 SLC1A2P43004 574 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 CLCN2P51788 898 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 KCNJ2P63252 427 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 OVGP1Q12889 678 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 TYSND1Q2T9J0 566 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 SIRPB2Q5JXA9 342 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 C6orf132Q5T0Z8 1188 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 LRRC8EQ6NSJ5 796 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 ESRP1Q6NXG1 681 aaKnown RBP8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 ELMSAN1Q6PJG2 1045 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 C16orf89Q6UX73 402 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 LONP2Q86WA8 852 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 ZNF354CQ86Y25 554 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 MIB1Q86YT6 1006 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 TP53INP2Q8IXH6 220 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 LGI2Q8N0V4 545 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 ELMOD1Q8N336 334 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 FSTL5Q8N475 847 aaPredicted RBP8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 TMEM199Q8N511 208 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 CCDC33Q8N5R6 958 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 PPFIBP2Q8ND30 876 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 OR4L1Q8NH43 312 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 CEP70Q8NHQ1 597 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 RIN3Q8TB24 985 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 DTX3LQ8TDB6 740 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 ACTRT2Q8TDY3 377 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 IGSF8Q969P0 613 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 L3HYPDHQ96EM0 354 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 TRIB3Q96RU7 358 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 SEMA3CQ99985 751 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 RTKNQ9BST9 563 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 C2orf49Q9BVC5 232 aaPredicted RBP8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 KLF16Q9BXK1 252 aaPredicted RBP8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 MAGEE1Q9HCI5 957 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 TCF7L2Q9NQB0 619 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 KLHL42Q9P2K6 505 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 TBX21Q9UL17 535 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 LZTS1Q9Y250 596 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 PCDHB1Q9Y5F3 818 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 TANC1Q9C0D5 1861 aa8.76□□□□□ -1.01
SNRNP40-202ENST00000373720 DYTNA2CJ06 578 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 RGSL1A5PLK6 1076 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 B2RBV5 119 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 J3KR12 359 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 CD3EAPO15446 510 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 LDB2O43679 373 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 STC2O76061 302 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 PRKCGP05129 697 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 RHOCP08134 193 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ATXN1LP0C7T5 689 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 HSPA1AP0DMV8 641 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 HSPA1BP0DMV9 641 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 TPH1P17752 444 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 CR2P20023 1033 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 LPOP22079 712 aaPredicted RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 GLDCP23378 1020 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ARNTP27540 789 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 PMLP29590 882 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 PGM1P36871 562 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms