RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ARL8BQ9NVJ2 186 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 OXSMQ9NWU1 459 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 ASB3Q9Y575 518 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 ZBBXA8MT70 800 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 TRIM13O60858 407 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 MZF1P28698 734 aaPredicted RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 CLCN5P51795 746 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 LRRC8EQ6NSJ5 796 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 ZNF783Q6ZMS7 281 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 LDB1Q86U70 411 aaPredicted RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 WDR75Q8IWA0 830 aaKnown RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 HS6ST3Q8IZP7 471 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 FSTL5Q8N475 847 aaPredicted RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 FIBCD1Q8N539 461 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 HJURPQ8NCD3 748 aaPredicted RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 STYXQ8WUJ0 223 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 INPP5DQ92835 1189 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 NXNL1Q96CM4 212 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 SCYL1Q96KG9 808 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 OLFM1Q99784 485 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 EBF4Q9BQW3 602 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 SIKE1Q9BRV8 207 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 SUDS3Q9H7L9 328 aaPredicted RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 SCUBE2Q9NQ36 999 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 PNPOQ9NVS9 261 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.69■□□□□ 0.74
HDAC1-201ENST00000373548 TARM1B6A8C7 271 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 H0Y626 953 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 ZMPSTE24O75844 475 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 S1PR4O95977 384 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 HTRA4P83105 476 aaPredicted RBP19.69■□□□□ 0.74
HDAC1-201ENST00000373548 LAMB3Q13751 1172 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 FAM91A1Q658Y4 838 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 LINGO4Q6UY18 593 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 TMC8Q8IU68 726 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.69■□□□□ 0.74
HDAC1-201ENST00000373548 KLHL23Q8NBE8 558 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 LRRC3Q9BY71 257 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 A0A087X1B8 175 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 KLHL2O95198 593 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 PRLP01236 227 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 SLC12A2P55011 1212 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 LILRA6Q6PI73 481 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 MAVSQ7Z434 540 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 PARP9Q8IXQ6 854 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 LMNTD2Q8IXW0 634 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 SPATA6LQ8N4H0 392 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 OR13C4Q8NGS5 318 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 UTP4Q969X6 686 aaKnown RBP19.69■□□□□ 0.74
HDAC1-201ENST00000373548 TMA16Q96EY4 203 aaKnown RBP19.69■□□□□ 0.74
HDAC1-201ENST00000373548 PTCD3Q96EY7 689 aaKnown RBP19.69■□□□□ 0.74
HDAC1-201ENST00000373548 NUDCD1Q96RS6 583 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 GATA5Q9BWX5 397 aaPredicted RBP19.69■□□□□ 0.74
HDAC1-201ENST00000373548 TDRD1Q9BXT4 1180 aaKnown RBP19.69■□□□□ 0.74
HDAC1-201ENST00000373548 XPR1Q9UBH6 696 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 STK39Q9UEW8 545 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 LNPEPQ9UIQ6 1025 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 SSX2IPQ9Y2D8 614 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 SPO11Q9Y5K1 396 aa19.69■□□□□ 0.74
HDAC1-201ENST00000373548 TMEM114B3SHH9 223 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 TRAFD1O14545 582 aaPredicted RBP19.68■□□□□ 0.74
HDAC1-201ENST00000373548 RPP40O75818 363 aaKnown RBP19.68■□□□□ 0.74
HDAC1-201ENST00000373548 TMCC1O94876 653 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 LUC7L3O95232 432 aaKnown RBP19.68■□□□□ 0.74
HDAC1-201ENST00000373548 GOT2P00505 430 aaKnown RBP19.68■□□□□ 0.74
HDAC1-201ENST00000373548 KRT72Q14CN4 511 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 SPNS2Q8IVW8 549 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 FAM217AQ8IXS0 508 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 MAB21L3Q8N8X9 362 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 WFDC5Q8TCV5 224 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 SREK1Q8WXA9 508 aaKnown RBP19.68■□□□□ 0.74
HDAC1-201ENST00000373548 FEM1AQ9BSK4 669 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 ARMCX1Q9P291 453 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 RIMKLBQ9ULI2 386 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 OR51B4Q9Y5P0 310 aa19.68■□□□□ 0.74
HDAC1-201ENST00000373548 CCDC162PA2VCL2 907 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 NRG2O14511 850 aaPredicted RBP19.67■□□□□ 0.74
HDAC1-201ENST00000373548 H2AFYO75367 372 aaKnown RBP19.67■□□□□ 0.74
HDAC1-201ENST00000373548 CXCL14O95715 111 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 LRG1P02750 347 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 CES1P23141 567 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 TSNAXIP1Q2TAA8 658 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 TTC16Q8NEE8 873 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 MRPS31Q92665 395 aaKnown RBP19.67■□□□□ 0.74
HDAC1-201ENST00000373548 UNKQ9C0B0 810 aaKnown RBP19.67■□□□□ 0.74
HDAC1-201ENST00000373548 ARIH1Q9Y4X5 557 aaPredicted RBP19.67■□□□□ 0.74
HDAC1-201ENST00000373548 ZNF195O14628 629 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 PDHA1P08559 390 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 ALOX15P16050 662 aaPredicted RBP19.67■□□□□ 0.74
HDAC1-201ENST00000373548 RASSF2P50749 326 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 NSUN2Q08J23 767 aaKnown RBP eCLIP19.67■□□□□ 0.74
HDAC1-201ENST00000373548 TUBB3Q13509 450 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 HECTD2Q5U5R9 776 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 HEXDCQ8WVB3 486 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 CLP1Q92989 425 aaKnown RBP19.67■□□□□ 0.74
HDAC1-201ENST00000373548 RMDN1Q96DB5 314 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 NSL1Q96IY1 281 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 RILPQ96NA2 401 aa19.67■□□□□ 0.74
HDAC1-201ENST00000373548 IGSF5Q9NSI5 407 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms