RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CSNK1DP48730 415 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 ZNF140P52738 457 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-203ENST00000371319 AP1S1P61966 158 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 PPP2R2DQ66LE6 453 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 TMC5Q6UXY8 1006 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 KIAA0408Q6ZU52 694 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 MFSD6LQ8IWD5 586 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 ARMC2Q8NEN0 867 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 LRRC3BQ96PB8 259 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 SMIM14Q96QK8 99 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 BBS2Q9BXC9 721 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 MARK1Q9P0L2 795 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 GGA2Q9UJY4 613 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 EBAG9O00559 213 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 BUD23O43709 281 aaKnown RBP17.62■□□□□ 0.41
SSBP3-203ENST00000371319 SNX3O60493 162 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 RPP40O75818 363 aaKnown RBP17.62■□□□□ 0.41
SSBP3-203ENST00000371319 PSMA3P25788 255 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 SLC20A2Q08357 652 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 DLG2Q15700 870 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 INSCQ1MX18 579 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 GLIPR1L2Q4G1C9 344 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 LY6G5CQ5SRR4 150 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 N4BP2L1Q5TBK1 243 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-203ENST00000371319 C16orf46Q6P387 395 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 KYAT3Q6YP21 454 aaKnown RBP17.62■□□□□ 0.41
SSBP3-203ENST00000371319 FAM47EQ6ZV65 393 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 GALNT7Q86SF2 657 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 CLEC14AQ86T13 490 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 CACNA2D3Q8IZS8 1091 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 MDGA1Q8NFP4 955 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 OR13C4Q8NGS5 318 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 CALML6Q8TD86 181 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 STYXQ8WUJ0 223 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 RMDN1Q96DB5 314 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 OTUB2Q96DC9 234 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 RSPRY1Q96DX4 576 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 CABS1Q96KC9 395 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 TBATAQ96M53 351 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 TM6SF2Q9BZW4 377 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 DCDC2Q9UHG0 476 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 MSRAQ9UJ68 235 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 SLC39A10Q9ULF5 831 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 OR51F1A6NGY5 319 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 AURKAO14965 403 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 EDF1O60869 148 aaKnown RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 HAUS5O94927 633 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 CRTAMO95727 393 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 SRCP12931 536 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 TYRP14679 529 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 CD151P48509 253 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 POLD2P49005 469 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 TMPRSS15P98073 1019 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 TAF1AQ15573 450 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 RAB30Q15771 203 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 ZNF789Q5FWF6 425 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 PTAR1Q7Z6K3 402 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 METTL3Q86U44 580 aaKnown RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 SLC41A1Q8IVJ1 513 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 ADGRG2Q8IZP9 1017 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 CELF5Q8N6W0 485 aaKnown RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 GDF15Q99988 308 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 ADGRE3Q9BY15 652 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 MANSC1Q9H8J5 431 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 SLCO1B3Q9NPD5 702 aa17.61■□□□□ 0.41
SSBP3-203ENST00000371319 FBXO6Q9NRD1 293 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 NLE1Q9NVX2 485 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 MARCH4Q9P2E8 410 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 EVLQ9UI08 416 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-203ENST00000371319 A0A096LPK6 155 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 FAM95CA0A1B0GW59 222 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 CCDC162PA2VCL2 907 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 ANKRD66B4E2M5 251 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 PLIN3O60664 434 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 GSRP00390 522 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 GOT2P00505 430 aaKnown RBP17.6■□□□□ 0.41
SSBP3-203ENST00000371319 C2P06681 752 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 GSTA1P08263 222 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 PABPC1P11940 636 aaKnown RBP17.6■□□□□ 0.41
SSBP3-203ENST00000371319 BGNP21810 368 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 SLC8A1P32418 973 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 LEPRP48357 1165 aaKnown RBP17.6■□□□□ 0.41
SSBP3-203ENST00000371319 STK19P49842 368 aaPredicted RBP17.6■□□□□ 0.41
SSBP3-203ENST00000371319 IRF9Q00978 393 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 SF3A3Q12874 501 aaKnown RBP eCLIP17.6■□□□□ 0.416e-12■■■■■ 79.1
SSBP3-203ENST00000371319 DGKKQ5KSL6 1271 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 CNSTQ6PJW8 725 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 C6orf89Q6UWU4 347 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 GLT6D1Q7Z4J2 308 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 CILP2Q8IUL8 1156 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 PLD6Q8N2A8 252 aaKnown RBP17.6■□□□□ 0.41
SSBP3-203ENST00000371319 CCDC197Q8NCU1 140 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 OR6P1Q8NGX9 317 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 ABHD8Q96I13 439 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 CDCA3Q99618 268 aaPredicted RBP17.6■□□□□ 0.41
SSBP3-203ENST00000371319 MECRQ9BV79 373 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 PITPNM3Q9BZ71 974 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 SUDS3Q9H7L9 328 aaPredicted RBP17.6■□□□□ 0.41
SSBP3-203ENST00000371319 TMEM216Q9P0N5 145 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms