RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SLC6A18Q96N87 628 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 RBM15Q96T37 977 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 MYOCQ99972 504 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 NUSAP1Q9BXS6 441 aaKnown RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 TDRD1Q9BXT4 1180 aaKnown RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 SLC25A51Q9H1U9 297 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 C10orf88Q9H8K7 445 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 GLOD4Q9HC38 313 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 PARD6AQ9NPB6 346 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 RSPH14Q9UHP6 348 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 R3HDM2Q9Y2K5 976 aaKnown RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 TRPM6Q9BX84 2022 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 F5H423 210 aaPredicted RBP14.93□□□□□ -0.02
COL9A1-204ENST00000370496 FOXD2O60548 495 aaPredicted RBP14.93□□□□□ -0.02
COL9A1-204ENST00000370496 FGGP02679 453 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 ATP1A1P05023 1023 aaKnown RBP14.93□□□□□ -0.02
COL9A1-204ENST00000370496 ZNF806P0C7X5 589 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 NFKB1P19838 968 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 TNNT3P45378 269 aaPredicted RBP14.93□□□□□ -0.02
COL9A1-204ENST00000370496 SKOR1P84550 965 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 SF3A2Q15428 464 aaKnown RBP14.93□□□□□ -0.02
COL9A1-204ENST00000370496 TEAD4Q15561 434 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 PCSK7Q16549 785 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 ZNF284Q2VY69 593 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 TMEM259Q4ZIN3 620 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 ITPRIPL1Q6GPH6 555 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 USP45Q70EL2 814 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 NDUFAF2Q8N183 169 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 LPCAT1Q8NF37 534 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 MAIP1Q8WWC4 291 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 IMP4Q96G21 291 aaKnown RBP14.93□□□□□ -0.02
COL9A1-204ENST00000370496 FRMD8P1Q9BZ68 369 aaPredicted RBP14.93□□□□□ -0.02
COL9A1-204ENST00000370496 TM9SF3Q9HD45 589 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 TRHDEQ9UKU6 1024 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 ZFR2Q9UPR6 939 aaKnown RBP14.93□□□□□ -0.02
COL9A1-204ENST00000370496 DMTF1Q9Y222 760 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 SLCO1B1Q9Y6L6 691 aa14.93□□□□□ -0.02
COL9A1-204ENST00000370496 LRRK1Q38SD2 2015 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 RIOK3O14730 519 aaKnown RBP14.92□□□□□ -0.02
COL9A1-204ENST00000370496 SLC31A1O15431 190 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 MMP2P08253 660 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 ELFN1P0C7U0 828 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 CYP2A6P11509 494 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-204ENST00000370496 ITIH2P19823 946 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 AKT2P31751 481 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 GRIA4P48058 902 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 GNG11P61952 73 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 RACK1P63244 317 aaKnown RBP14.92□□□□□ -0.02
COL9A1-204ENST00000370496 SEMG2Q02383 582 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 SGCGQ13326 291 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 SLC14A2Q15849 920 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 LAYNQ6UX15 382 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 PID1Q7Z2X4 250 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 KIAA2013Q8IYS2 634 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 SLC35B2Q8TB61 432 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 IFT43Q96FT9 208 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 ORAI3Q9BRQ5 295 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 C1QTNF7Q9BXJ2 289 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 ADGRE3Q9BY15 652 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 GBA3Q9H227 469 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 EBF2Q9HAK2 575 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 PCDH9Q9HC56 1237 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 FZD3Q9NPG1 666 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 B4GALT6Q9UBX8 382 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 DNPEPQ9ULA0 475 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 PHTF1Q9UMS5 762 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 SLC6A14Q9UN76 642 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 CHKBQ9Y259 395 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 ADAMTS9Q9P2N4 1935 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 PCDH15Q96QU1 1955 aa14.92□□□□□ -0.02
COL9A1-204ENST00000370496 DOCK9Q9BZ29 2069 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 LNP1A1A4G5 178 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 CFAP69A5D8W1 941 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 IGLON5A6NGN9 336 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 C10orf142B7Z368 130 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 PRAMEF26H0Y7S4 382 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 MMP20O60882 483 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 TM7SF2O76062 418 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 C6P13671 934 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 CTPS1P17812 591 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 HNRNPA2B1P22626 353 aaKnown RBP14.91□□□□□ -0.02
COL9A1-204ENST00000370496 VIPR1P32241 457 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 CD68P34810 354 aaPredicted RBP14.91□□□□□ -0.02
COL9A1-204ENST00000370496 PI4KAP42356 2102 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 C21orf59P57076 290 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 LMNB2Q03252 620 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 LONRF2Q1L5Z9 754 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 TMEM52BQ4KMG9 183 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 SLC23A3Q6PIS1 610 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 ARHGEF18Q6ZSZ5 1173 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 DPPA4Q7L190 304 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 FAM71DQ8N9W8 422 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 SPATA22Q8NHS9 363 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 C1orf54Q8WWF1 131 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 SKA1Q96BD8 255 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 PBKQ96KB5 322 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 SPATA13Q96N96 652 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 TMEM121Q9BTD3 319 aa14.91□□□□□ -0.02
COL9A1-204ENST00000370496 EDEM2Q9BV94 578 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms