RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 RAI2Q9Y5P3 530 aa15.19■□□□□ 0.02
SMPDL3A-201ENST00000368440 PIEZO1Q92508 2521 aa15.19■□□□□ 0.02
SMPDL3A-201ENST00000368440 IGLON5A6NGN9 336 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 H7C0C1 242 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 NEMP1O14524 444 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 RIOK3O14730 519 aaKnown RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 FANCGO15287 622 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 SLC31A1O15431 190 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 TSPAN6O43657 245 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 CPP00450 1065 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 PDHA1P08559 390 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 XPAP23025 273 aaPredicted RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 RBL1P28749 1068 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 CASQ1P31415 396 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 ATP5OP48047 213 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 CSNK1EP49674 416 aaKnown RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 EIF3EP60228 445 aaKnown RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 BNC1Q01954 994 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 AASDHQ4L235 1098 aaPredicted RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 PRPF39Q86UA1 669 aaKnown RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 SLC35F6Q8N357 371 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 GPR161Q8N6U8 529 aaKnown RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 PAF1Q8N7H5 531 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 CEP76Q8TAP6 659 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 SERAC1Q96JX3 654 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 SMIM14Q96QK8 99 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 NUSAP1Q9BXS6 441 aaKnown RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 PCDHB9Q9Y5E1 797 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 HACD1B0YJ81 288 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 KCNK3O14649 394 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 FZD6O60353 706 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 MMP20O60882 483 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 WNT1P04628 370 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 ENGP17813 658 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 CD68P34810 354 aaPredicted RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 MMP12P39900 470 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 CD86P42081 329 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 SKOR1P84550 965 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 XRCC4Q13426 336 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 SETMARQ53H47 684 aaPredicted RBP15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 TEX44Q53QW1 395 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 SEL1L2Q5TEA6 688 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 KIAA1161Q6NSJ0 714 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 OR2I1PQ8NGU4 316 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 HTR3CQ8WXA8 447 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 FEM1CQ96JP0 617 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 EDEM2Q9BV94 578 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 COQ6Q9Y2Z9 468 aa15.18■□□□□ 0.02
SMPDL3A-201ENST00000368440 A0A1B0GVT2 93 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 A8MX80 341 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 ENC1O14682 589 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 PGLSO95336 258 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 RBP3P10745 1247 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 AFF3P51826 1226 aaKnown RBP15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 RPS21P63220 83 aaKnown RBP15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 RACK1P63244 317 aaKnown RBP15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 RALGDSQ12967 914 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 GRIK2Q13002 908 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 TMEM52BQ4KMG9 183 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 NAPEPLDQ6IQ20 393 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 RABEPKQ7Z6M1 372 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 ADAT2Q7Z6V5 191 aaKnown RBP15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 ZNF567Q8N184 647 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 TEKT5Q96M29 485 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 RBM15Q96T37 977 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 TDRD1Q9BXT4 1180 aaKnown RBP15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 SLC17A9Q9BYT1 436 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 CARD9Q9H257 536 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 GLOD4Q9HC38 313 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 AASDHPPTQ9NRN7 309 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 CHKBQ9Y259 395 aa15.17■□□□□ 0.02
SMPDL3A-201ENST00000368440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 A0A1W2PR77 199 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 F5H423 210 aaPredicted RBP15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 H0Y8X5 98 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 RAD51BO15315 384 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 PAK4O96013 591 aaPredicted RBP15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 PRLP01236 227 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 NFKB1P19838 968 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 SUOXP51687 545 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 FAM193AP78312 1265 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 ELP6Q0PNE2 266 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 ARMC12Q5T9G4 340 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 KDM7AQ6ZMT4 941 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 SPATA22Q8NHS9 363 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 CXorf40AQ8TE69 158 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 PIH1D2Q8WWB5 315 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 SPOCK2Q92563 424 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 IMP4Q96G21 291 aaKnown RBP15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 HAUS2Q9NVX0 235 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 B4GALT6Q9UBX8 382 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 TPX2Q9ULW0 747 aaKnown RBP15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 DMTF1Q9Y222 760 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 A0A0U1RQS6 177 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 PRR5-ARHGAP8B1AHC4 643 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 MT-CYBP00156 380 aaPredicted RBP15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 CTPS1P17812 591 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 CES1P23141 567 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 CD38P28907 300 aa15.16■□□□□ 0.02
SMPDL3A-201ENST00000368440 CXCR5P32302 372 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms