RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MAXP61244 160 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 GBE1Q04446 702 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 AGERQ15109 404 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 MARC1Q5VT66 337 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 LRRC38Q5VT99 294 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 ERAP2Q6P179 960 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 FATE1Q969F0 183 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 TSGA13Q96PP4 275 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 UCKL1Q9NWZ5 548 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 FTSJ1Q9UET6 329 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 PCDHGC4Q9Y5F7 938 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 LRP4O75096 1905 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.07■□□□□ 0.64
CKS1B-203ENST00000368439 CFAP69A5D8W1 941 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 PIAS2O75928 621 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 GM2AP17900 193 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 SLC1A1P43005 524 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 MAGEA1P43355 309 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 LIG3P49916 1009 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 TRAF2Q12933 501 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 PDE1CQ14123 709 aaPredicted RBP19.07■□□□□ 0.64
CKS1B-203ENST00000368439 IHHQ14623 411 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 IRF4Q15306 451 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 WSCD2Q2TBF2 565 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 ZNF542PQ5EBM4 170 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 RALGPS1Q5JS13 557 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 CFAP58Q5T655 872 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 DPPA4Q7L190 304 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 VSIG1Q86XK7 387 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 CCDC170Q8IYT3 715 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 PLD5Q8N7P1 536 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 GATA6Q92908 595 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 CNDP2Q96KP4 475 aaKnown RBP19.07■□□□□ 0.64
CKS1B-203ENST00000368439 PANX2Q96RD6 677 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 SCUBE2Q9NQ36 999 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 DTLQ9NZJ0 730 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 KLF15Q9UIH9 416 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 PNMA8BQ9ULN7 279 aaPredicted RBP19.07■□□□□ 0.64
CKS1B-203ENST00000368439 TFR2Q9UP52 801 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 MSRB2Q9Y3D2 182 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 HYOU1Q9Y4L1 999 aa19.07■□□□□ 0.64
CKS1B-203ENST00000368439 EPG5Q9HCE0 2579 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 LRRD1A4D1F6 860 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 TRIM38O00635 465 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 ENC1O14682 589 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 MATN3O15232 486 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 SOCS5O75159 536 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 LDOC1O95751 146 aaPredicted RBP19.06■□□□□ 0.64
CKS1B-203ENST00000368439 CSF2P04141 144 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 COMTP21964 271 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 CCNCP24863 283 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 EIF2B5Q13144 721 aaKnown RBP19.06■□□□□ 0.64
CKS1B-203ENST00000368439 IFI16Q16666 785 aaKnown RBP19.06■□□□□ 0.64
CKS1B-203ENST00000368439 SLC9A4Q6AI14 798 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 ALG1LQ6GMV1 187 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 PARGQ86W56 976 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 BBS5Q8N3I7 341 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 LRRN4Q8WUT4 740 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 NSMCE1Q8WV22 266 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 PCDHA13Q9Y5I0 950 aa19.06■□□□□ 0.64
CKS1B-203ENST00000368439 GOLGA8CPA6NN73 597 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 C1QTNF9BB2RNN3 333 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 TOR1BO14657 336 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 C1QTNF9P0C862 333 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 NME1P15531 152 aaKnown RBP19.05■□□□□ 0.64
CKS1B-203ENST00000368439 YPEL5P62699 121 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 POLR2LP62875 67 aaKnown RBP19.05■□□□□ 0.64
CKS1B-203ENST00000368439 DNAJC3Q13217 504 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 PROX2Q3B8N5 592 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 TIGD7Q6NT04 549 aaPredicted RBP19.05■□□□□ 0.64
CKS1B-203ENST00000368439 LIPIQ6XZB0 460 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 HDAC11Q96DB2 347 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 C1QTNF7Q9BXJ2 289 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 NT5MQ9NPB1 228 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 DNAJC28Q9NX36 388 aa19.05■□□□□ 0.64
CKS1B-203ENST00000368439 A0A1W2PQ67 120 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 SOWAHDA6NJG2 315 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 SIGLEC6O43699 453 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 FZD6O60353 706 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 ACADVLP49748 655 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 ZNF211Q13398 564 aaPredicted RBP19.04■□□□□ 0.64
CKS1B-203ENST00000368439 LRRC14Q15048 493 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 ZFYVE27Q5T4F4 411 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 TMPRSS7Q7RTY8 843 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 RHOT1Q8IXI2 618 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 CBARPQ8N350 705 aaPredicted RBP19.04■□□□□ 0.64
CKS1B-203ENST00000368439 OR4C6Q8NH72 309 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 SEMA3CQ99985 751 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 GOLPH3Q9H4A6 298 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 B4GALT6Q9UBX8 382 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 SALL4Q9UJQ4 1053 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 USP24Q9UPU5 2620 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 PCDHGA1Q9Y5H4 931 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 ALG6Q9Y672 507 aa19.04■□□□□ 0.64
CKS1B-203ENST00000368439 KMT2BQ9UMN6 2715 aaPredicted RBP19.04■□□□□ 0.64
CKS1B-203ENST00000368439 GOLGA4Q13439 2230 aaKnown RBP19.04■□□□□ 0.64
CKS1B-203ENST00000368439 A0A0A6YYK5 440 aaPredicted RBP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 RCCD1A6NED2 376 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 PGLSO95336 258 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 CPP00450 1065 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms