RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TMEM39AQ9NV64 488 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 SLC39A10Q9ULF5 831 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 IPPQ9Y573 584 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 SH3PXD2BA1X283 911 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 TARM1B6A8C7 271 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 ACOT8O14734 319 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 RNASEH2AO75792 299 aaKnown RBP14.83□□□□□ -0.04
PRKN-204ENST00000366896 F9P00740 461 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 SBK3P0C264 359 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 EPHA3P29320 983 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 PPARGP37231 505 aaPredicted RBP14.83□□□□□ -0.04
PRKN-204ENST00000366896 DPP6P42658 865 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 CD97P48960 835 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 DAOAP59103 153 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 GRM3Q14832 879 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 UGP2Q16851 508 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 ARL13BQ3SXY8 428 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 LPCAT2Q7L5N7 544 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 ZC3HC1Q86WB0 502 aaKnown RBP14.83□□□□□ -0.04
PRKN-204ENST00000366896 SCLYQ96I15 445 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 ZNF597Q96LX8 424 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 TSNARE1Q96NA8 513 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 TSGA13Q96PP4 275 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 MRM3Q9HC36 420 aaKnown RBP14.83□□□□□ -0.04
PRKN-204ENST00000366896 FAM105AQ9NUU6 356 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 TMEM30AQ9NV96 361 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 EPS15L1Q9UBC2 864 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 TLK1Q9UKI8 766 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 C7orf72A4D263 438 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 PHGDHO43175 533 aaKnown RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 DDHD2O94830 711 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 H6PDO95479 791 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 CYP2C18P33260 490 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 GLRBP48167 497 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 CCL23P55773 120 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 NSUN2Q08J23 767 aaKnown RBP eCLIP14.82□□□□□ -0.04
PRKN-204ENST00000366896 LSM12Q3MHD2 195 aaKnown RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 MGAT5BQ3V5L5 792 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 ZSCAN18Q8TBC5 510 aaPredicted RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 TRPC4APQ8TEL6 797 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 USP13Q92995 863 aaPredicted RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 TASP1Q9H6P5 420 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 LIN28AQ9H9Z2 209 aaKnown RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 WDR41Q9HAD4 459 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 PLGRKTQ9HBL7 147 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 FAF1Q9UNN5 650 aaPredicted RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 HEMK1Q9Y5R4 338 aaPredicted RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 TMEM221A6NGB7 291 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 CFLARO15519 480 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 JUNP05412 331 aaKnown RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 TFEBP19484 476 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 AVPR1AP37288 418 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 SLC12A1Q13621 1099 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 PRPSAP1Q14558 356 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 RAB41Q5JT25 222 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 CARM1Q86X55 608 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 RNF148Q8N7C7 305 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 CNTD1Q8N815 330 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 ZNF512Q96ME7 567 aaPredicted RBP14.82□□□□□ -0.04
PRKN-204ENST00000366896 ADAM2Q99965 735 aa14.82□□□□□ -0.04
PRKN-204ENST00000366896 ALPK3Q96L96 1907 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 H3BNH8 94 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 GRID2O43424 1007 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 ENO3P13929 434 aaPredicted RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 VARSP26640 1264 aaKnown RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 MAGEA10P43363 369 aaPredicted RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 GRIA4P48058 902 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 TMEM198Q66K66 360 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 EME1Q96AY2 570 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 CELF6Q96J87 481 aaKnown RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 MARK4Q96L34 752 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 RANBP9Q96S59 729 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 NUF2Q9BZD4 464 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 CRTAC1Q9NQ79 661 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 DDIT4Q9NX09 232 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 ARHGEF38Q9NXL2 777 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 TET1Q8NFU7 2136 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 SHROOM3Q8TF72 1996 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 ARHGEF37A1IGU5 675 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 PARNO95453 639 aaKnown RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 CXCL10P02778 98 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 STT3AP46977 705 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 TUBA4AP68366 448 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 ARL13AQ5H913 290 aaPredicted RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 RTN4RL1Q86UN2 441 aaPredicted RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 RNF168Q8IYW5 571 aaPredicted RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 PTCD2Q8WV60 388 aaKnown RBP14.81□□□□□ -0.04
PRKN-204ENST00000366896 KCTD4Q8WVF5 259 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 LINC01599Q8WXQ3 324 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 OSBPL11Q9BXB4 747 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 OSBPL6Q9BZF3 934 aa14.81□□□□□ -0.04
PRKN-204ENST00000366896 TRIM43BA6NCK2 446 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 STX16-NPEPL1H3BU86 382 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 NPHS1O60500 1241 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 PIGNO95427 931 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 USP17L7P0C7H9 530 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 NCAM1P13591 858 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 ATXN3P54252 364 aaPredicted RBP14.8□□□□□ -0.04
PRKN-204ENST00000366896 NUP107P57740 925 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms