RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 SLC29A1Q99808 456 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 NXF3Q9H4D5 531 aaKnown RBP12.87□□□□□ -0.35
CAPN8-201ENST00000366872 TMEM45AQ9NWC5 275 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 OR12D3Q9UGF7 316 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 FBXO5Q9UKT4 447 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 G3BP2Q9UN86 482 aaKnown RBP12.87□□□□□ -0.35
CAPN8-201ENST00000366872 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
CAPN8-201ENST00000366872 NEU3Q9UQ49 428 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 MBLAC1A4D2B0 266 aaPredicted RBP12.87□□□□□ -0.35
CAPN8-201ENST00000366872 AKAP10O43572 662 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 PFDN1O60925 122 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 LRIG2O94898 1065 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 MATN4O95460 622 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 TPH1P17752 444 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 SLC12A2P55011 1212 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 PRKCQQ04759 706 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 AGKQ53H12 422 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 ZNF618Q5T7W0 954 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 TIGD7Q6NT04 549 aaPredicted RBP12.87□□□□□ -0.35
CAPN8-201ENST00000366872 RANBP10Q6VN20 620 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 Q6ZNX1 250 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 FASTKD5Q7L8L6 764 aaKnown RBP12.87□□□□□ -0.35
CAPN8-201ENST00000366872 BHLHA9Q7RTU4 235 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 SPRED1Q7Z699 444 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 ZNF354CQ86Y25 554 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 PCDH20Q8N6Y1 951 aaKnown RBP12.87□□□□□ -0.35
CAPN8-201ENST00000366872 NETO2Q8NC67 525 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 SGF29Q96ES7 293 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 C9orf16Q9BUW7 83 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 WDCPQ9H6R7 721 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 CDHR5Q9HBB8 845 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 AGPAT4Q9NRZ5 378 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 TBC1D13Q9NVG8 400 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 FAIMQ9NVQ4 179 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 GTSE1Q9NYZ3 720 aa12.87□□□□□ -0.35
CAPN8-201ENST00000366872 CROCCQ5TZA2 2017 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 YJEFN3A6XGL0 299 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 TMEM233B4DJY2 109 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 MATN3O15232 486 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 TRPA1O75762 1119 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 IGLV3-25P01717 112 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 ZNF286BP0CG31 522 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 LHX1P48742 406 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 C1QTNF8P60827 252 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 NAA20P61599 178 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 GRIK2Q13002 908 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 SPIDRQ14159 915 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 INPP5AQ14642 412 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 SMAD1Q15797 465 aaKnown RBP12.86□□□□□ -0.35
CAPN8-201ENST00000366872 NRF1Q16656 503 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 BTBD8Q5XKL5 378 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 OLFML2BQ68BL8 750 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 GPR141Q7Z602 305 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 GPR180Q86V85 440 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 DENND6AQ8IWF6 608 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 PNPT1Q8TCS8 783 aaKnown RBP12.86□□□□□ -0.35
CAPN8-201ENST00000366872 ELMO2Q96JJ3 720 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 MARK4Q96L34 752 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 PPP1R36Q96LQ0 422 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 OMDQ99983 421 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 PCDHAC1Q9H158 963 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 HIPK3Q9H422 1215 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 GSTO2Q9H4Y5 243 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 CSNK1G1Q9HCP0 422 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 ATP13A1Q9HD20 1204 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 DDIT4Q9NX09 232 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 TMEM9Q9P0T7 183 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 ZNF510Q9Y2H8 683 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 SNX13Q9Y5W8 968 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 HHLA1C9JL84 531 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 GPC4O75487 556 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 GPIP06744 558 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 MMP3P08254 477 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 GPX3P22352 226 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 AVPR1AP37288 418 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 NDST2P52849 883 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 NRG1Q02297 640 aaPredicted RBP12.86□□□□□ -0.35
CAPN8-201ENST00000366872 CYTH1Q15438 398 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 BRMS1LQ5PSV4 323 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 AFMIDQ63HM1 303 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 ESRP1Q6NXG1 681 aaKnown RBP12.86□□□□□ -0.35
CAPN8-201ENST00000366872 ARHGAP12Q8IWW6 846 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 PAPD5Q8NDF8 572 aaKnown RBP12.86□□□□□ -0.35
CAPN8-201ENST00000366872 MOCOSQ96EN8 888 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 TUBA1CQ9BQE3 449 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
CAPN8-201ENST00000366872 OSER1Q9NX31 292 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 ARHGEF38Q9NXL2 777 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 ACTR3BQ9P1U1 418 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 TRAF6Q9Y4K3 522 aa12.86□□□□□ -0.35
CAPN8-201ENST00000366872 DOCK4Q8N1I0 1966 aa12.85□□□□□ -0.35
CAPN8-201ENST00000366872 TTC24A2A3L6 582 aaPredicted RBP12.85□□□□□ -0.35
CAPN8-201ENST00000366872 DLGAP1O14490 977 aa12.85□□□□□ -0.35
CAPN8-201ENST00000366872 STX1BP61266 288 aa12.85□□□□□ -0.35
CAPN8-201ENST00000366872 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
CAPN8-201ENST00000366872 SOX4Q06945 474 aaPredicted RBP12.85□□□□□ -0.35
CAPN8-201ENST00000366872 SFSWAPQ12872 951 aaKnown RBP12.85□□□□□ -0.35
CAPN8-201ENST00000366872 IRF5Q13568 498 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms