RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PIH1D1Q9NWS0 290 aaKnown RBP20.79■□□□□ 0.92
SHISA4-201ENST00000362011 BFARQ9NZS9 450 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 IL36AQ9UHA7 158 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 STON1Q9Y6Q2 735 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 WDR87Q6ZQQ6 2873 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 LRRK1Q38SD2 2015 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 ATXN1LP0C7T5 689 aaKnown RBP20.78■□□□□ 0.92
SHISA4-201ENST00000362011 MGAT1P26572 445 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 MAGEA4P43358 317 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 PMS2P54278 862 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 PRKCQQ04759 706 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ENPP2Q13822 863 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 GALNT3Q14435 633 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 SIRPB2Q5JXA9 342 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 CAMK1DQ8IU85 385 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ZBED8Q8IZ13 594 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 CHPFQ8IZ52 775 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 PAF1Q8N7H5 531 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 OR8D1Q8WZ84 308 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ACOX2Q99424 681 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ADGRE3Q9BY15 652 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ZDHHC4Q9NPG8 344 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 CACNA2D2Q9NY47 1150 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ANTXRLA6NF34 631 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 SDR42E2A6NKP2 422 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ALOX15BO15296 676 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 HTRA2O43464 458 aaPredicted RBP20.78■□□□□ 0.92
SHISA4-201ENST00000362011 FZD6O60353 706 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 SIN3BO75182 1162 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 PGLSO95336 258 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 CPP00450 1065 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 EPHX1P07099 455 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 MRPS21P82921 87 aaKnown RBP20.78■□□□□ 0.92
SHISA4-201ENST00000362011 FASTKD3Q14CZ7 662 aaKnown RBP20.78■□□□□ 0.92
SHISA4-201ENST00000362011 OTOGLQ3ZCN5 2332 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 FBXO43Q4G163 708 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 CCDC38Q502W7 563 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 C9orf64Q5T6V5 341 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ZC3H14Q6PJT7 736 aaKnown RBP20.78■□□□□ 0.92
SHISA4-201ENST00000362011 TRMT11Q7Z4G4 463 aaKnown RBP20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ANKMY2Q8IV38 441 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 MREGQ8N565 214 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 LPCAT1Q8NF37 534 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 PYROXD1Q8WU10 500 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 LRIG1Q96JA1 1093 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 SIGLEC10Q96LC7 697 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 ZNF641Q96N77 438 aaPredicted RBP20.78■□□□□ 0.92
SHISA4-201ENST00000362011 OSBPL1AQ9BXW6 950 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 CDC42EP4Q9H3Q1 356 aaKnown RBP20.78■□□□□ 0.92
SHISA4-201ENST00000362011 SUV39H2Q9H5I1 410 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 SYBUQ9NX95 663 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 CHMP2BQ9UQN3 213 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 TEX264Q9Y6I9 313 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 WASF2Q9Y6W5 498 aa20.78■□□□□ 0.92
SHISA4-201ENST00000362011 A0A1W2PQ67 120 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 SHISA7A6NL88 538 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 TRAFD1O14545 582 aaPredicted RBP20.77■□□□□ 0.91
SHISA4-201ENST00000362011 PRLP01236 227 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 UGT2B4P06133 528 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 PDHA1P08559 390 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 TPH1P17752 444 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 NTSR1P30989 418 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 ELK3P41970 407 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 WASP42768 502 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 EPHB1P54762 984 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 HP1BP3Q5SSJ5 553 aaPredicted RBP20.77■□□□□ 0.91
SHISA4-201ENST00000362011 CERCAMQ5T4B2 595 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 CFAP58Q5T655 872 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 SDE2Q6IQ49 451 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 GDPD4Q6W3E5 623 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 TRMT10CQ7L0Y3 403 aaKnown RBP20.77■□□□□ 0.91
SHISA4-201ENST00000362011 STK40Q8N2I9 435 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 AGGF1Q8N302 714 aaeCLIP20.77■□□□□ 0.91
SHISA4-201ENST00000362011 MPP5Q8N3R9 675 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 SUMF1Q8NBK3 374 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 FBXO36Q8NEA4 188 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 GRIN3AQ8TCU5 1115 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 SHDQ96IW2 340 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 C9orf72Q96LT7 481 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 TTC25Q96NG3 672 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 FOXQ1Q9C009 403 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 IL22Q9GZX6 179 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 NINJ2Q9NZG7 142 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 SAMD15Q9P1V8 674 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 PCDHB9Q9Y5E1 797 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 MAD1L1Q9Y6D9 718 aa20.77■□□□□ 0.91
SHISA4-201ENST00000362011 PRNPP04156 253 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 CHRM1P11229 460 aaPredicted RBP20.76■□□□□ 0.91
SHISA4-201ENST00000362011 GRIA4P48058 902 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 RPL26P61254 145 aaKnown RBP20.76■□□□□ 0.91
SHISA4-201ENST00000362011 ELAVL3Q14576 367 aaKnown RBP20.76■□□□□ 0.91
SHISA4-201ENST00000362011 ZNF528Q3MIS6 628 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 C2orf27AQ580R0 203 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 ARSIQ5FYB1 569 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 SPDYCQ5MJ68 293 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 CASC4Q6P4E1 433 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 ZNF852Q6ZMS4 543 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 UBLCP1Q8WVY7 318 aaPredicted RBP20.76■□□□□ 0.91
SHISA4-201ENST00000362011 VOPP1Q96AW1 172 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 STAMBPL1Q96FJ0 436 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms