RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 FEM1CQ96JP0 617 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 KCTD15Q96SI1 283 aaPredicted RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 OSBPL6Q9BZF3 934 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 GBA3Q9H227 469 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 PTPRJQ12913 1337 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 C2CD4BA6NLJ0 364 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 POP4O95707 220 aaKnown RBP13.53□□□□□ -0.24
LDB3-202ENST00000361373 JAK1P23458 1154 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 EPS8Q12929 822 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 CLYBLQ8N0X4 340 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 CNBD2Q96M20 576 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 KLHL5Q96PQ7 755 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 SNX15Q9NRS6 342 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 PRKAG3Q9UGI9 489 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 MATN3O15232 486 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 GALNT3Q14435 633 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 CCDC81Q6ZN84 652 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 RERGQ96A58 199 aaPredicted RBP13.53□□□□□ -0.24
LDB3-202ENST00000361373 MAGED4Q96JG8 741 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 AP2A1O95782 977 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 CTPS1P17812 591 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 PIK3R1P27986 724 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 RTL3Q8N8U3 475 aaKnown RBP13.53□□□□□ -0.24
LDB3-202ENST00000361373 KCTD4Q8WVF5 259 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 APOL4Q9BPW4 351 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 TRMT13Q9NUP7 481 aaKnown RBP13.53□□□□□ -0.24
LDB3-202ENST00000361373 RAI2Q9Y5P3 530 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 PIPSLA2A3N6 862 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 IL10RBQ08334 325 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 GPR141Q7Z602 305 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 FAM228AQ86W67 206 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 CFAP52Q8N1V2 620 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 C9orf16Q9BUW7 83 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 ARHGEF4Q9NR80 690 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 SOHLH2Q9NX45 425 aa13.53□□□□□ -0.24
LDB3-202ENST00000361373 NOCTQ9UK39 431 aaKnown RBP13.53□□□□□ -0.24
LDB3-202ENST00000361373 FAM237BA0A1B0GVD1 139 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 CYP7B1O75881 506 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 KRT75O95678 551 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 PKMP14618 531 aaKnown RBP13.52□□□□□ -0.24
LDB3-202ENST00000361373 TCF3P15923 654 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 RFC2P35250 354 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 IRX1P78414 480 aaPredicted RBP13.52□□□□□ -0.24
LDB3-202ENST00000361373 GAD2Q05329 585 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 PRKG2Q13237 762 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 DET1Q7L5Y6 550 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 KREMEN2Q8NCW0 462 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 ITFG1Q8TB96 612 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 C11orf49Q9H6J7 331 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 INTS7Q9NVH2 962 aaKnown RBP13.52□□□□□ -0.24
LDB3-202ENST00000361373 GGA2Q9UJY4 613 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 SLC12A4Q9UP95 1085 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 CHKBQ9Y259 395 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 ASF1AQ9Y294 204 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 GLYATL1P3A0A0U1RQE8 302 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 CCL16O15467 120 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 LRIG2O94898 1065 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 SNRPB2P08579 225 aaKnown RBP13.52□□□□□ -0.24
LDB3-202ENST00000361373 SPATA31D3P0C874 917 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 PPIBP23284 216 aaKnown RBP13.52□□□□□ -0.24
LDB3-202ENST00000361373 HNRNPH1P31943 449 aaKnown RBP13.52□□□□□ -0.24
LDB3-202ENST00000361373 DRICH1Q6PGQ1 229 aaPredicted RBP13.52□□□□□ -0.24
LDB3-202ENST00000361373 CASP12Q6UXS9 341 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 CHST9Q7L1S5 443 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 DPP10Q8N608 796 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 WFIKKN2Q8TEU8 576 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 SLC22A17Q8WUG5 538 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 LINGO1Q96FE5 620 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 CDRT15Q96T59 188 aa13.52□□□□□ -0.24
LDB3-202ENST00000361373 A0A0U1RQF3 1178 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 MYBPHLA2RUH7 354 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 MFSD11O43934 449 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 PEX10O60683 326 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 SPAM1P38567 509 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 ABCG1P45844 678 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 BLVRAP53004 296 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 CTBP1Q13363 440 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 RFTN1Q14699 578 aaPredicted RBP13.52□□□□□ -0.25
LDB3-202ENST00000361373 TRIM60Q495X7 471 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TAC4Q86UU9 113 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TCF12Q99081 682 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 XPR1Q9UBH6 696 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 MRPS33Q9Y291 106 aaKnown RBP13.52□□□□□ -0.25
LDB3-202ENST00000361373 ROBO1Q9Y6N7 1651 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3DA0A087WVF3 549 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3IA0A087WXS9 549 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3EA0A087X179 549 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3KA0A087X1G2 549 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3FA6NER0 549 aaPredicted RBP13.52□□□□□ -0.25
LDB3-202ENST00000361373 SLC38A8A6NNN8 435 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3LB9A6J9 549 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 AZIN1O14977 448 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 SNX3O60493 162 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3HP0C7X1 549 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 UBTFL6P0CB48 400 aaPredicted RBP13.52□□□□□ -0.25
LDB3-202ENST00000361373 LRPAP1P30533 357 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3GQ6DHY5 549 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3CQ6IPX1 549 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms