RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 PRMT2P55345 433 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 ARHGEF6Q15052 776 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 USP41Q3LFD5 358 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 LRRC8EQ6NSJ5 796 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 COG4Q9H9E3 785 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 CDH22Q9UJ99 828 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 CHD5Q8TDI0 1954 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 LOC285095A0A1B0GVY8 99 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 ACSL4O60488 711 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 BAG2O95816 211 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 CHRNGP07510 517 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 VEGFBP49765 207 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 ERFP50548 548 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 RBM20Q5T481 1227 aaKnown RBP22.75■■□□□ 1.23
LDB1-201ENST00000361198 LIPMQ5VYY2 423 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 SPNS2Q8IVW8 549 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 OR52K2Q8NGK3 314 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 AGR3Q8TD06 166 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 JADE3Q92613 823 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 OMDQ99983 421 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 POLR1EQ9GZS1 481 aaKnown RBP22.75■■□□□ 1.23
LDB1-201ENST00000361198 XPR1Q9UBH6 696 aa22.75■■□□□ 1.23
LDB1-201ENST00000361198 MROH6A6NGR9 719 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 CCL22O00626 93 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 H2AFYO75367 372 aaKnown RBP22.74■■□□□ 1.23
LDB1-201ENST00000361198 PAPSS2O95340 614 aaPredicted RBP22.74■■□□□ 1.23
LDB1-201ENST00000361198 GRIA4P48058 902 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 CDC16Q13042 620 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 C5orf22Q49AR2 442 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 KIAA0408Q6ZU52 694 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 NDNQ99608 321 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 NACA2Q9H009 215 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 PDFQ9HBH1 243 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 ACTL7AQ9Y615 435 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 MICAL3Q7RTP6 2002 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 FESP07332 822 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 CCR10P46092 362 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 TUFMP49411 452 aaKnown RBP22.74■■□□□ 1.23
LDB1-201ENST00000361198 ARSDP51689 593 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 FSCBQ5H9T9 825 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 ARMC3Q5W041 872 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 PTAR1Q7Z6K3 402 aaPredicted RBP22.74■■□□□ 1.23
LDB1-201ENST00000361198 DHDDSQ86SQ9 333 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 PHTF2Q8N3S3 785 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 KCTD3Q9Y597 815 aa22.74■■□□□ 1.23
LDB1-201ENST00000361198 ZFP37Q9Y6Q3 630 aaPredicted RBP22.74■■□□□ 1.23
LDB1-201ENST00000361198 TANC1Q9C0D5 1861 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 ZNF840PA6NDX5 716 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 SEC24AO95486 1093 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 NCF2P19878 526 aaPredicted RBP22.73■■□□□ 1.23
LDB1-201ENST00000361198 ITGAXP20702 1163 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 DNAJB1P25685 340 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 PEX19P40855 299 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 LEPRP48357 1165 aaKnown RBP22.73■■□□□ 1.23
LDB1-201ENST00000361198 POU4F1Q01851 419 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 MTA1Q13330 715 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 CCNIQ14094 377 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 ZNF235Q14590 738 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 RNF111Q6ZNA4 994 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 FRMD7Q6ZUT3 714 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 TDRD5Q8NAT2 981 aaKnown RBP22.73■■□□□ 1.23
LDB1-201ENST00000361198 MAPK15Q8TD08 544 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 CALML6Q8TD86 181 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 CDK5RAP1Q96SZ6 601 aaKnown RBP22.73■■□□□ 1.23
LDB1-201ENST00000361198 PAK6Q9NQU5 681 aaPredicted RBP22.73■■□□□ 1.23
LDB1-201ENST00000361198 ZDHHC7Q9NXF8 308 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 HOXD9P28356 352 aaPredicted RBP22.73■■□□□ 1.23
LDB1-201ENST00000361198 NAGLUP54802 743 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 DENND1CQ8IV53 801 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 OR7D4Q8NG98 312 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 ZNF483Q8TF39 744 aaPredicted RBP22.73■■□□□ 1.23
LDB1-201ENST00000361198 CLSTN3Q9BQT9 956 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 DRC3Q9H069 523 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 CWH43Q9H720 699 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 MAN1C1Q9NR34 630 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 PDP2Q9P2J9 529 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 BACE2Q9Y5Z0 518 aa22.73■■□□□ 1.23
LDB1-201ENST00000361198 MAP3K13O43283 966 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 COCHO43405 550 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 DCXO43602 365 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 LDB2O43679 373 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 ZBTB14O43829 449 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 DLX3O60479 287 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 HMGA1P17096 107 aaKnown RBP22.72■■□□□ 1.23
LDB1-201ENST00000361198 MPSTP25325 297 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 SLC12A2P55011 1212 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 RPS24P62847 133 aaKnown RBP22.72■■□□□ 1.23
LDB1-201ENST00000361198 SLC9B1Q4ZJI4 515 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 CILP2Q8IUL8 1156 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 RNF168Q8IYW5 571 aaPredicted RBP22.72■■□□□ 1.23
LDB1-201ENST00000361198 OR6P1Q8NGX9 317 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 HDAC10Q969S8 669 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 IGSF21Q96ID5 467 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 OLFM1Q99784 485 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 POMPQ9Y244 141 aa22.72■■□□□ 1.23
LDB1-201ENST00000361198 LYNP07948 512 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 COX4I1P13073 169 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 GLDCP23378 1020 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 APLP1P51693 650 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 EPHB1P54762 984 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms