RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 RSPRY1Q96DX4 576 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 EBNA1BP2Q99848 306 aaKnown RBP13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 NSUN3Q9H649 340 aaKnown RBP13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 PLAC1Q9HBJ0 212 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 NUMBLQ9Y6R0 609 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 FAM237BA0A1B0GVD1 139 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 NVLO15381 856 aaKnown RBP13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 KDELR3O43731 214 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 RFPL1O75677 317 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 CRHR1P34998 444 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 ZNF235Q14590 738 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 ZNF77Q15935 545 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 MPP7Q5T2T1 576 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 C6orf163Q5TEZ5 329 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 RINLQ6ZS11 566 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 TPGS1Q6ZTW0 290 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 CYS1Q717R9 158 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 DNAAF3Q8N9W5 541 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 ARMC2Q8NEN0 867 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 MLPHQ9BV36 600 aaPredicted RBP13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 LINC00597Q9H2U6 94 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 SIRPGQ9P1W8 387 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 TBC1D14Q9P2M4 693 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 MAD1L1Q9Y6D9 718 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 DOCK8Q8NF50 2099 aa13.28□□□□□ -0.28
SQSTM1-201ENST00000360718 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 FAM159BA6NKW6 160 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 CXorf49A8MYA2 514 aaPredicted RBP13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 CACNG3O60359 315 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 MAGEC1O60732 1142 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 PAX7P23759 505 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 PGM1P36871 562 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 MAGEA3P43357 314 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 SLC34A1Q06495 639 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 DLX2Q07687 328 aaPredicted RBP13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 BST1Q10588 318 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 CASC4Q6P4E1 433 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 TMEM184AQ6ZMB5 413 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 TIFABQ6ZNK6 161 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 CDHR3Q6ZTQ4 885 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 MFN1Q8IWA4 741 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 TEX26Q8N6G2 289 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 SIKE1Q9BRV8 207 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 OSBPL1AQ9BXW6 950 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 SLC25A51Q9H1U9 297 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 PDFQ9HBH1 243 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 PIH1D1Q9NWS0 290 aaKnown RBP13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 UBP1Q9NZI7 540 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 ZFATQ9P243 1243 aa13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 UBA2Q9UBT2 640 aaPredicted RBP13.27□□□□□ -0.28
SQSTM1-201ENST00000360718 PSMG1O95456 288 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 CALRP27797 417 aaKnown RBP13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 MZF1P28698 734 aaPredicted RBP13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 SESN2P58004 480 aaPredicted RBP13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 IHHQ14623 411 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 CHI3L2Q15782 390 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 KCTD11Q693B1 232 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 KYAT3Q6YP21 454 aaKnown RBP13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 NPAS3Q8IXF0 933 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 NDUFAF2Q8N183 169 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 EFHBQ8N7U6 833 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 SPATA22Q8NHS9 363 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 SIGLEC10Q96LC7 697 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 FAM167BQ9BTA0 163 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 NAT9Q9BTE0 207 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 BFARQ9NZS9 450 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 SORCS3Q9UPU3 1222 aa13.27□□□□□ -0.29
SQSTM1-201ENST00000360718 TTC24A2A3L6 582 aaPredicted RBP13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 A6NHS1 94 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 B2RBV5 119 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 CBX4O00257 560 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 GJB3O75712 270 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 RGS19P49795 217 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 RAP1GDS1P52306 607 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 MAXP61244 160 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 OCRLQ01968 901 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 USP4Q13107 963 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 STX3Q13277 289 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 MPP3Q13368 585 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 RFTN1Q14699 578 aaPredicted RBP13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 KPNB1Q14974 876 aaKnown RBP13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 RCN1Q15293 331 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 DNAL1Q4LDG9 190 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 ANKRD54Q6NXT1 300 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 GPR149Q86SP6 731 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 TMEM25Q86YD3 366 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 CCNJLQ8IV13 435 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 PGBD5Q8N414 524 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 FSD1LQ9BXM9 530 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 ACE2Q9BYF1 805 aaPredicted RBP13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 NMUR2Q9GZQ4 415 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 POLR1EQ9GZS1 481 aaKnown RBP13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 CLEC1BQ9P126 229 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 SEPT3Q9UH03 358 aa13.26□□□□□ -0.29
SQSTM1-201ENST00000360718 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms