RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TARS2Q9BW92 718 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 DNAJC11Q9NVH1 559 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 AXIN2Q9Y2T1 843 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 AP4B1Q9Y6B7 739 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 UNC13BO14795 1591 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 STXBP1P61764 594 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 USP41Q3LFD5 358 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 GNASQ5JWF2 1037 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF697Q5TEC3 545 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ACE2Q9BYF1 805 aaPredicted RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 MKLN1Q9UL63 735 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 MAN2B2Q9Y2E5 1009 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 OR10H1Q9Y4A9 318 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PIWIL4Q7Z3Z4 852 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ADAMTSL2Q86TH1 951 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 GCATO75600 419 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 RLN2P04090 185 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 SUSD4Q5VX71 490 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 GIN1Q9NXP7 522 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 GTPBP1O00178 669 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 OTCP00480 354 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ADRA1DP25100 572 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 RPL21P46778 160 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 AAGABQ6PD74 315 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ADGRG2Q8IZP9 1017 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 OR5T3Q8NGG3 340 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 TRIM17Q9Y577 477 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 APOC4-APOC2K7ER74 178 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 APOC2P02655 101 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 CTSKP43235 329 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 MMP13P45452 471 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF280DQ6N043 979 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 SLITRK4Q8IW52 837 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF567Q8N184 647 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PNPT1Q8TCS8 783 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF512BQ96KM6 892 aaPredicted RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 BARX2Q9UMQ3 279 aaPredicted RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 OR2AT4A6NND4 320 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PLK1P53350 603 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PEX6Q13608 980 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 CDKL4Q5MAI5 379 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 OVOS1Q6IE37 1185 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 DAGLBQ8NCG7 672 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 GDF3Q9NR23 364 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 NCKAP1Q9Y2A7 1128 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 FTH1P02794 183 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ETS2P15036 469 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 MAPK8P45983 427 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ELP6Q0PNE2 266 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 GFM1Q96RP9 751 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 DNTTP04053 509 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 LTA4HP09960 611 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 POLR1EQ9GZS1 481 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PEX16Q9Y5Y5 336 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PRMT5O14744 637 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TRMUO75648 421 aaKnown RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 GIMD1P0DJR0 217 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 CCDC107Q8WV48 283 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 RNF31Q96EP0 1072 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 FCRL4Q96PJ5 515 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SLC33A1O00400 549 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 MMP10P09238 476 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 UTS2BQ765I0 119 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 CMTR2Q8IYT2 770 aaKnown RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 RTKNQ9BST9 563 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TBC1D10AQ9BXI6 508 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ZFYVE28Q9HCC9 887 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 GULP1Q9UBP9 304 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 DNPEPQ9ULA0 475 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TBX4P57082 545 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 RHEBQ15382 184 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 MAFFQ9ULX9 164 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 E7ENX8 843 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 KDM4BO94953 1096 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 DCKP27707 260 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 AFTPHQ6ULP2 937 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 JAZF1Q86VZ6 243 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 OR10H5Q8NGA6 315 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 C15orf40Q8WUR7 153 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 UXTQ9UBK9 157 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 GNRH1P01148 92 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 DEFA5Q01523 94 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 NOL9Q5SY16 702 aaKnown RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ATG9AQ7Z3C6 839 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 OR2L3Q8NG85 312 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 EXO5Q9H790 373 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 OSGEPQ9NPF4 335 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 ABHD14A-ACY1A0A1B0GW23 586 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 FOSL1P15407 271 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 SLC26A2P50443 739 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 BAATQ14032 418 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TMC8Q8IU68 726 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 PCDH20Q8N6Y1 951 aaKnown RBP9.33□□□□□ -0.92
VPS13A-203ENST00000360280 MARK4Q96L34 752 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 TFR2Q9UP52 801 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 BCKDKO14874 412 aa9.33□□□□□ -0.92
VPS13A-203ENST00000360280 AVILO75366 819 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms