RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CALCRP30988 508 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CASP3P42574 277 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 BAG6P46379 1132 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 SCNN1DP51172 638 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 SLC7A2P52569 658 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 MLLT10P55197 1068 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ROR1Q01973 937 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ZNF33BQ06732 778 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 UBAP2LQ14157 1087 aaKnown RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 RCAN2Q14206 197 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TBCEQ15813 527 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ANO4Q32M45 955 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 FBXO43Q4G163 708 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 RALGPS1Q5JS13 557 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 KANK2Q63ZY3 851 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 HPS6Q86YV9 775 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 PALM2Q8IXS6 379 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 RDH10Q8IZV5 341 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 SPARTQ8N0X7 666 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 LRRC47Q8N1G4 583 aaKnown RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 RHEBL1Q8TAI7 183 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 PYDC1Q8WXC3 89 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ATG4AQ8WYN0 398 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 RNF34Q969K3 372 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ELMO3Q96BJ8 720 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CCDC97Q96F63 343 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 WBP1Q96G27 269 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 MED18Q9BUE0 208 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ABCG4Q9H172 646 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 COG4Q9H9E3 785 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 WDR41Q9HAD4 459 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 APOBEC3GQ9HC16 384 aaKnown RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 FZD3Q9NPG1 666 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 B3GNT2Q9NY97 397 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 EMC3Q9P0I2 261 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 DNAJB9Q9UBS3 223 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 PHF11Q9UIL8 331 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TMX2Q9Y320 296 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 DAGLAQ9Y4D2 1042 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CORINQ9Y5Q5 1042 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 MAU2Q9Y6X3 613 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 OBSL1O75147 1896 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TCRBV7S3A2A0A539 114 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 HEATR9A2RTY3 570 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TNPO2O14787 897 aaKnown RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 HAT1O14929 419 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 POLR1CO15160 346 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 MTSS1O43312 755 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TRIM13O60858 407 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 DDHD2O94830 711 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ENO2P09104 434 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CHRNB1P11230 501 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CD6P30203 668 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CD68P34810 354 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 BTDP43251 543 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 NPY2RP49146 381 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ALDH9A1P49189 494 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 RGS7P49802 495 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 IFITM3Q01628 133 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ORC1Q13415 861 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 HADHQ16836 314 aaKnown RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TKFCQ3LXA3 575 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CELF3Q5SZQ8 465 aaKnown RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TSTD2Q5T7W7 516 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 AGAP6Q5VW22 663 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 HACD4Q5VWC8 232 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 KAZNQ674X7 775 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 SPATA19Q7Z5L4 167 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 AMIGO2Q86SJ2 522 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TRIM50Q86XT4 487 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CPNE8Q86YQ8 564 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ARID3BQ8IVW6 561 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 SFRP1Q8N474 314 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CCNYL1Q8N7R7 359 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TMEM35BQ8NCS4 154 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ZSWIM2Q8NEG5 633 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 OR13J1Q8NGT2 312 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ACTL9Q8TC94 416 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CLPTM1LQ96KA5 538 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 AGAP4Q96P64 663 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 TRIB3Q96RU7 358 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 MBOAT4Q96T53 435 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 NDEL1Q9GZM8 345 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 KCNN2Q9H2S1 579 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 COQ10BQ9H8M1 238 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 XPNPEP3Q9NQH7 507 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 HEBP1Q9NRV9 189 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 C1orf112Q9NSG2 853 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 C20orf96Q9NUD7 363 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 ZIM2Q9NZV7 527 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 PPARGC1AQ9UBK2 798 aaKnown RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 KCNN3Q9UGI6 736 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 SERPINA10Q9UK55 444 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 MTF2Q9Y483 593 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 PPP2R3BQ9Y5P8 575 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 HELZP42694 1942 aaKnown RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 A0A0A0MRY4 1105 aa4.54□□□□□ -1.68
PTPN22-201ENST00000359785 CXorf49A8MYA2 514 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-201ENST00000359785 GNPATO15228 680 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms