RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FOXR2Q6PJQ5 311 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 APTXQ7Z2E3 356 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 MARVELD2Q8N4S9 558 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TBC1D30Q9Y2I9 924 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 DHRS7Q9Y394 339 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SCELO95171 688 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CPSF4O95639 269 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 MIPP30301 263 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 YAP1P46937 504 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 IL17AQ16552 155 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 HKDC1Q2TB90 917 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 IL27RAQ6UWB1 636 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PROSER1Q86XN7 944 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 BLOC1S5Q8TDH9 187 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 MKL1Q969V6 931 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 NSUN4Q96CB9 384 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SPON2Q9BUD6 331 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SPON1Q9HCB6 807 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PIH1D1Q9NWS0 290 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ADCY10Q96PN6 1610 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 UNC13BO14795 1591 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PLK1P53350 603 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 VBP1P61758 197 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CBWD6Q4V339 395 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 DCAF6Q58WW2 860 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ARSHQ5FYA8 562 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CBWD3Q5JTY5 395 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CBWD5Q5RIA9 395 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 NRG4Q8WWG1 115 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TNIP3Q96KP6 325 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ZFP42Q96MM3 310 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ASB2Q96Q27 587 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 MTMR9Q96QG7 549 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ACE2Q9BYF1 805 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 GPN1Q9HCN4 374 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 MAN1C1Q9NR34 630 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 GGA3Q9NZ52 723 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TMEM216Q9P0N5 145 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 RELAQ04206 551 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CDH17Q12864 832 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SEMA3AQ14563 771 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 HLFQ16534 295 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SHROOM1Q2M3G4 852 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TIGD4Q8IY51 512 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FAM84BQ96KN1 310 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CRISPLD1Q9H336 500 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 QRICH2Q9H0J4 1663 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TSPOAP1O95153 1857 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 KLF11O14901 512 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CYP7B1O75881 506 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TRUB2O95900 331 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 RLN1P04808 185 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 IL7P13232 177 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PTP4A2Q12974 167 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PTRHD1Q6GMV3 140 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 DPY19L2Q6NUT2 758 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SPPL2CQ8IUH8 684 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 UNC5BQ8IZJ1 945 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 NELL1Q92832 810 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF285Q96NJ3 590 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TMEM138Q9NPI0 162 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 NYAP2Q9P242 653 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 LRIG2O94898 1065 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ERAP2Q6P179 960 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SLFN11Q7Z7L1 901 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 EFHBQ8N7U6 833 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PTGR2Q8N8N7 351 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 GLIS3Q8NEA6 775 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 DNAJB14Q8TBM8 379 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FAM136AQ96C01 138 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 NGLY1Q96IV0 654 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PCDHB18PQ96TA0 734 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 HEPHQ9BQS7 1158 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 MTMR12Q9C0I1 747 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SNX9Q9Y5X1 595 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 KCNE2Q9Y6J6 123 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TLN2Q9Y4G6 2542 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 UMPSP11172 480 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 MAZP56270 477 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 LIPEQ05469 1076 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FSTL1Q12841 308 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 RIOX2Q8IUF8 465 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ZC3H7AQ8IWR0 971 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PRICKLE1Q96MT3 831 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SACM1LQ9NTJ5 587 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 RAD17O75943 681 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PSMD4P55036 377 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ORC1Q13415 861 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FASTKD3Q14CZ7 662 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 INSCQ1MX18 579 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 BMT2Q1RMZ1 405 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TPRG1LQ5T0D9 272 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 C3orf67Q6ZVT6 689 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SV2AQ7L0J3 742 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ERMP1Q7Z2K6 904 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ERMAPQ96PL5 475 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SH2D3AQ9BRG2 576 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TARS2Q9BW92 718 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 INTS10Q9NVR2 710 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 DAGLAQ9Y4D2 1042 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms