RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SUZ12Q15022 739 aaKnown RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 PSMD5Q16401 504 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 MSANTD1Q6ZTZ1 278 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 GLT6D1Q7Z4J2 308 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 GMCL1P1Q8NEA9 526 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 TAS1R2Q8TE23 839 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 FRMD6Q96NE9 622 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 FNDC11Q9BVV2 318 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 EHD4Q9H223 541 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 PCDH12Q9NPG4 1184 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 PLCL2Q9UPR0 1127 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 MAN2B2Q9Y2E5 1009 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 PDE2AO00408 941 aaPredicted RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 FESP07332 822 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 PTPN1P18031 435 aaKnown RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 EIF4BP23588 611 aaKnown RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 PSMA1P25786 263 aaKnown RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 GRIA4P48058 902 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 BCL2L1Q07817 233 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 CBFBQ13951 182 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 FAM171A1Q5VUB5 890 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 SMIM5Q71RC9 77 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 SAPCD2Q86UD0 394 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 TRIM74Q86UV6 250 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 TRIM73Q86UV7 250 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 PSTKQ8IV42 348 aaKnown RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 COLGALT2Q8IYK4 626 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 SNIP1Q8TAD8 396 aaKnown RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 FAM136AQ96C01 138 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 FAM172BPA6NC97 362 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 CASTOR2A6NHX0 329 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 ACSL4O60488 711 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 AKAP3O75969 853 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 OR5F1O95221 314 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 IFNA7P01567 189 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 TLX1P31314 330 aaPredicted RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 GRIK4Q16099 956 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 LYPLAL1Q5VWZ2 237 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 SPATA19Q7Z5L4 167 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 LENG9Q96B70 501 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 RCN3Q96D15 328 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 FDXACB1Q9BRP7 624 aaPredicted RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 RHOBTB2Q9BYZ6 727 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 LRRC19Q9H756 370 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 C9P02748 559 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 CYP2C18P33260 490 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 MMP13P45452 471 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 ACVR2BQ13705 512 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 CAMK1Q14012 370 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 IKBKEQ14164 716 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 MYBPC3Q14896 1274 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 STXBP5Q5T5C0 1151 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 SLC27A1Q6PCB7 646 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 BAP1Q92560 729 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 OSMRQ99650 979 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 ABHD16BQ9H3Z7 469 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 TDRKHQ9Y2W6 561 aaKnown RBP12.9□□□□□ -0.34
SMC4-202ENST00000357388 SUV39H1O43463 412 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 CATP04040 527 aaKnown RBP12.9□□□□□ -0.34
SMC4-202ENST00000357388 PGRP06401 933 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 NR4A1P22736 598 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 OR1E1P30953 314 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 NEPROQ6NW34 567 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.9□□□□□ -0.34
SMC4-202ENST00000357388 SLITRK4Q8IW52 837 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
SMC4-202ENST00000357388 FCGR1BQ92637 280 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 SPATC1LQ9H0A9 340 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 ASB7Q9H672 318 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 EXO5Q9H790 373 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 SEMA4BQ9NPR2 832 aaPredicted RBP12.9□□□□□ -0.34
SMC4-202ENST00000357388 PXMP2Q9NR77 195 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 TMX2Q9Y320 296 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 NCANO14594 1321 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 SLC37A4O43826 429 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 OR10H3O60404 316 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 TM7SF2O76062 418 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 SNX4O95219 450 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 IGFBP4P22692 258 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 ITGA7Q13683 1181 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 EIF2S3LQ2VIR3 472 aaKnown RBP12.9□□□□□ -0.34
SMC4-202ENST00000357388 SETMARQ53H47 684 aaPredicted RBP12.9□□□□□ -0.34
SMC4-202ENST00000357388 UBE2Q1Q7Z7E8 422 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 HASPINQ8TF76 798 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
SMC4-202ENST00000357388 NXNL1Q96CM4 212 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 DIRAS2Q96HU8 199 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 CPB2Q96IY4 423 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 MAGEE1Q9HCI5 957 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 AASSQ9UDR5 926 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 TBC1D24Q9ULP9 559 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 ZNF432O94892 652 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 S100A2P29034 98 aa12.9□□□□□ -0.34
SMC4-202ENST00000357388 IST1P53990 364 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms