RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 GPRC5DQ9NZD1 345 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GULP1Q9UBP9 304 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SLC30A4O14863 429 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 SOX30O94993 753 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 FAM153BP0C7A2 387 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 HOXD10P28358 340 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 DYNLL1P63167 89 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TCEAL1Q15170 157 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 FAM153CQ494X1 144 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 NELL1Q92832 810 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 COPS7BQ9H9Q2 264 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 KIDINS220Q9ULH0 1771 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 A0A1W2PQ67 120 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 AVILO75366 819 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 NOL4O94818 638 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 IFNGP01579 166 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 RPS9P46781 194 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 FAXCQ5TGI0 409 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 SWSAP1Q6NVH7 229 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 RFX8Q6ZV50 586 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZBTB8BQ8NAP8 495 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 HAVCR2Q8TDQ0 301 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF606Q8WXB4 792 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 SPOCK2Q92563 424 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ERLEC1Q96DZ1 483 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF317Q96PQ6 595 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 WDCPQ9H6R7 721 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM134Q9H6X4 195 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 INTS13Q9NVM9 706 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 MLXQ9UH92 298 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TESMINQ9Y4I5 508 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PKNOX1P55347 436 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 EEFSECP57772 596 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 UBE3AQ05086 875 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 OTUD3Q5T2D3 398 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 HERC6Q8IVU3 1022 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 CCDC28AQ8IWP9 274 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TTC29Q8NA56 475 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PIGBQ92521 554 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 NODALQ96S42 347 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 YME1L1Q96TA2 773 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ELOVL4Q9GZR5 314 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 MIA3Q5JRA6 1907 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 FAM86C2PA6NEL3 165 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PTTG1O95997 202 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 GSTM1P09488 218 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 RBM34P42696 430 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 EPC2Q52LR7 807 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 OOSP2Q86WS3 158 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 GTPBP2Q9BX10 602 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 RANBP3Q9H6Z4 567 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 MID1IP1Q9NPA3 183 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 DDIT4Q9NX09 232 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 A0A1W2PQ72 361 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PDE2AO00408 941 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 APOC1P02654 83 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 YAP1P46937 504 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 SPOUT1Q5T280 376 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 C15orf52Q6ZUT6 534 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF767PQ75MW2 155 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM192Q8IY95 271 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 NECTIN3Q9NQS3 549 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 DUSP10Q9Y6W6 482 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ARPC4-TTLL3A0A0A6YYG9 625 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 CYP27B1O15528 508 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PLEKHG4Q58EX7 1191 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 DENND5BQ6ZUT9 1274 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TRNAU1APQ9NX07 287 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ERN1O75460 977 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ADORA2BP29275 332 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF33AQ06730 810 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 OVGP1Q12889 678 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TRAM1Q15629 374 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 C15orf59Q2T9L4 293 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 HSD17B12Q53GQ0 312 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 GDPGP1Q6ZNW5 385 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 FAM83AQ86UY5 434 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 EEF1AKMT1Q8WVE0 214 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PABPC5Q96DU9 382 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM176AQ96HP8 235 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 RUVBL2Q9Y230 463 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 A0A087WZ62 844 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 F5H5T6 163 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 SYT16Q17RD7 645 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 HEATR4Q86WZ0 1026 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TTYH1Q9H313 450 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 KCTD5Q9NXV2 234 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 SAMHD1Q9Y3Z3 626 aaKnown RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ILVBLA1L0T0 632 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 SH3PXD2BA1X283 911 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF487B1APH4 448 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 NPHS1O60500 1241 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ST8SIA6P61647 398 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 MFSD14CQ5VZR4 134 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 FAM91A1Q658Y4 838 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PJA1Q8NG27 643 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 C1QTNF7Q9BXJ2 289 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 CPNE5Q9HCH3 593 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PPP2R3BQ9Y5P8 575 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms