RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ZNF433Q8N7K0 673 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 LPAR1Q92633 364 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 FBXO10Q9UK96 956 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ARP10275 920 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 IST1P53990 364 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 MXD1Q05195 221 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 WDR59Q6PJI9 974 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 CNPPD1Q9BV87 410 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 EXO5Q9H790 373 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 HPF1Q9NWY4 346 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 AKAP7Q9P0M2 348 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 PSMD13Q9UNM6 376 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 POLR3HQ9Y535 204 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 DNM1LO00429 736 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 LRIG2O94898 1065 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 LHX1P48742 406 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 ARPC4P59998 168 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 C1QBPQ07021 282 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 BNIP2Q12982 314 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 PLET1Q6UQ28 207 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 LGI2Q8N0V4 545 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 CDYL2Q8N8U2 506 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 EHD1Q9H4M9 534 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 NEK6Q9HC98 313 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 RCCD1A6NED2 376 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 H3BM21 787 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 NRG3P56975 720 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 XIAPP98170 497 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 DLG1Q12959 904 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 CYP2A13Q16696 494 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 KCNT2Q6UVM3 1135 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 SH3RF1Q7Z6J0 888 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 NXNL1Q96CM4 212 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 CLPTM1LQ96KA5 538 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 S100A14Q9HCY8 104 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 SORCS3Q9UPU3 1222 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 DLC1Q96QB1 1528 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 HACD1B0YJ81 288 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 DGKAP23743 735 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 DNAJB2P25686 324 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 EPHB3P54753 998 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNHIT3Q15649 155 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 C4orf46Q504U0 113 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 SETMARQ53H47 684 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 OGFOD2Q6N063 350 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 SMIM5Q71RC9 77 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 CLHC1Q8NHS4 586 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 RP9Q8TA86 221 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 KCTD4Q8WVF5 259 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 TSEN15Q8WW01 171 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 TSPAN18Q96SJ8 248 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 ATP13A1Q9HD20 1204 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 PNPOQ9NVS9 261 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 MCIDASD6RGH6 385 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 GNB5O14775 395 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 MAGEB3O15480 346 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 MTA2O94776 668 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 BMP6P22004 513 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 EPHA3P29320 983 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 UGT1A5P35504 534 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 MNDAP41218 407 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 ALG11Q2TAA5 492 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 COLGALT2Q8IYK4 626 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 GALNT15Q8N3T1 639 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 KIAA0895Q8NCT3 520 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 ITCHQ96J02 903 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNF285Q96NJ3 590 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 TRHDEQ9UKU6 1024 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 NRXN1Q9ULB1 1477 aa11.08□□□□□ -0.64
GTF3C1-201ENST00000356183 A0A087X0B3 334 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 BUD23O43709 281 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 AZGP1P25311 298 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 PHC1P78364 1004 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 FATE1Q969F0 183 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 PGLYRP2Q96PD5 576 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 GPER1Q99527 375 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 ARL8BQ9NVJ2 186 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 GPR182O15218 404 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 OR10H2O60403 315 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 PGRP06401 933 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 HGFP14210 728 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 FSTL1Q12841 308 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 PSMD5Q16401 504 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 TRAPPC5Q8IUR0 188 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 PWWP2AQ96N64 755 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 C17orf75Q9HAS0 396 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 TMLHEQ9NVH6 421 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 SPG21Q9NZD8 308 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 PCDHGA10Q9Y5H3 936 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 GTPBP1O00178 669 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 USP17L7P0C7H9 530 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 MYBPC3Q14896 1274 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 PDK4Q16654 411 aa11.07□□□□□ -0.64
GTF3C1-201ENST00000356183 FAM13CQ8NE31 585 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms