RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 KYQ8NBH2 561 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 SNRNP25Q9BV90 132 aaKnown RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 ARHGEF4Q9NR80 690 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 LOC100653049A0A140TA62 436 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 SPAM1P38567 509 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 AVPR1BP47901 424 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 LGALS3BPQ08380 585 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 GRIK5Q16478 980 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 C15orf59Q2T9L4 293 aaPredicted RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 COLEC12Q5KU26 742 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 VITQ6UXI7 678 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 CERS2Q96G23 380 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 POMKQ9H5K3 350 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 VSTM5A8MXK1 200 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 TSHRP16473 764 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 NFKB1P19838 968 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 RBL1P28749 1068 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 FEN1P39748 380 aaKnown RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 N4BP2L1Q5TBK1 243 aaPredicted RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 BRSK1Q8TDC3 778 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 ZIM3Q96PE6 472 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 HEY2Q9UBP5 337 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 KLQ9UEF7 1012 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 SMIM28A0A1B0GU29 152 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 H3BN98 237 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 AOC2O75106 756 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 TNFP01375 233 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 CCDC166P0CW27 439 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 RHOQP17081 205 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 FASP25445 335 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 MASP1P48740 699 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 ST13P50502 369 aaKnown RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 CNSTQ6PJW8 725 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 ING5Q8WYH8 240 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 APOPT1Q96IL0 206 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 AP4S1Q9Y587 144 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 TSPAN1O60635 241 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 SERPINB7O75635 380 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 TNFSF9P41273 254 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 PNLIPRP1P54315 467 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 ST3GAL1Q11201 340 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 BMT2Q1RMZ1 405 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 PAPD7Q5XG87 772 aaKnown RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 FAM228AQ86W67 206 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 IRF7Q92985 503 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 ZNF514Q96K75 400 aaPredicted RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 DPEP2Q9H4A9 486 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 PCDHAC2Q9Y5I4 1007 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 ULK1O75385 1050 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 AGXTP21549 392 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 PPIBP23284 216 aaKnown RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 AP1S1P61966 158 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 TBL3Q12788 808 aaKnown RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 ABRQ12979 859 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 TRIP10Q15642 601 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 LRRC23Q53EV4 343 aaPredicted RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 FGD3Q5JSP0 725 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 SPDYCQ5MJ68 293 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 BCO2Q9BYV7 579 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 RIBC2Q9H4K1 309 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 MCIDASD6RGH6 385 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 BRCC3P46736 316 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 NDST2P52849 883 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 RFTN1Q14699 578 aaPredicted RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 CAMK1DQ8IU85 385 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 SH2D3CQ8N5H7 860 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 SLC22A18Q96BI1 424 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 RAB11FIP5Q9BXF6 653 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 LMAN2LQ9H0V9 348 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 SLC9A8Q9Y2E8 581 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 CYP1A2P05177 515 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 ALAS2P22557 587 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 TAS2R50P59544 299 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 PTGES3Q15185 160 aaKnown RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 PDGFRLQ15198 375 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 LCLAT1Q6UWP7 414 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 EPHX4Q8IUS5 362 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 MRPL45Q9BRJ2 306 aaKnown RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 RERGLQ9H628 205 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 DNAJC11Q9NVH1 559 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 GMEB2Q9UKD1 530 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 PLCH1Q4KWH8 1693 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 CCT8L1PA6NM43 557 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 PDX1P52945 283 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 NME5P56597 212 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 CDK18Q07002 472 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
FN1-204ENST00000356005 MTFMTQ96DP5 389 aaKnown RBP11.31□□□□□ -0.6
FN1-204ENST00000356005 NR2F1P10589 423 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms