RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 RASAL2Q9UJF2 1139 aa7.15□□□□□ -1.26
VPS13A-201ENST00000355766 TCFL5Q9UL49 500 aa7.15□□□□□ -1.26
VPS13A-201ENST00000355766 CNOT6Q9ULM6 557 aaKnown RBP7.15□□□□□ -1.26
VPS13A-201ENST00000355766 APOBEC2Q9Y235 224 aaKnown RBP7.15□□□□□ -1.26
VPS13A-201ENST00000355766 TNRC6BQ9UPQ9 1833 aaKnown RBP7.15□□□□□ -1.27
VPS13A-201ENST00000355766 APC2O95996 2303 aa7.15□□□□□ -1.27
VPS13A-201ENST00000355766 OR14I1A6ND48 311 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 B8ZZF3 427 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 E5RJQ4 531 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 K7EQS6 105 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 LRCH4O75427 683 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 DAB1O75553 588 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 GJB3O75712 270 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 TJP3O95049 919 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 ZRANB2O95218 330 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 HNRNPLP14866 589 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 HOXA5P20719 270 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 GPD1P21695 349 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 PSMA2P25787 234 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 SDC4P31431 198 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 CXCR5P32302 372 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 RFC1P35251 1148 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 MAGEA11P43364 429 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 KIR2DL1P43626 348 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 KIR2DL2P43627 348 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 IFNAR2P48551 515 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 TUFMP49411 452 aaKnown RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 SLC25A11Q02978 314 aaKnown RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 MTA1Q13330 715 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 KLF1Q13351 362 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 PDK2Q15119 407 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 SLC14A2Q15849 920 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 ZNF77Q15935 545 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 LONRF2Q1L5Z9 754 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 MGAT5BQ3V5L5 792 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 BOLA3Q53S33 107 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 C2orf27AQ580R0 203 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 TFDP3Q5H9I0 405 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 RAB41Q5JT25 222 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 ADGRF1Q5T601 910 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 FAM102AQ5T9C2 384 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 CDCP2Q5VXM1 449 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 WSCD1Q658N2 575 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 OVOS1Q6IE37 1185 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 PMF1Q6P1K2 205 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 VSTM1Q6UX27 236 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 STRADAQ7RTN6 431 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 GLRX5Q86SX6 157 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 MAP7D3Q8IWC1 876 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 FUKQ8N0W3 1084 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 FRMD1Q8N878 549 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 SLC2A14Q8TDB8 520 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 OSCP1Q8WVF1 389 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 NUP205Q92621 2012 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 CENPIQ92674 756 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 KRT35Q92764 455 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 C20orf173Q96LM9 149 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 PKMYT1Q99640 499 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 PARD6BQ9BYG5 372 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 TSPYL1Q9H0U9 437 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 GOLPH3Q9H4A6 298 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 VIPAS39Q9H9C1 493 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 DMAP1Q9NPF5 467 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 GDF3Q9NR23 364 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 DUS2Q9NX74 493 aaKnown RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 STAP1Q9ULZ2 295 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 PACSIN2Q9UNF0 486 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-201ENST00000355766 NME7Q9Y5B8 376 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 WNT6Q9Y6F9 365 aa7.14□□□□□ -1.27
VPS13A-201ENST00000355766 NAV2Q8IVL1 2488 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 ASCC3Q8N3C0 2202 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 ANTXRLA6NF34 631 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 J3QKU1 62 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 PAPSS1O43252 624 aaPredicted RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 PRAMEF1O95521 474 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 GAS8O95995 478 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 SYPP08247 313 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 PYGMP11217 842 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 OPRD1P41143 372 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 MATKP42679 507 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 PCBP3P57721 371 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 RPL7AP62424 266 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 MRPS21P82921 87 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 C2orf54Q08AI8 447 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 BYSLQ13895 437 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 SSPNQ14714 243 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 TAF12Q16514 161 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 CCNG2Q16589 344 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 BBS9Q3SYG4 887 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 HSF5Q4G112 596 aaPredicted RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 SLC39A12Q504Y0 691 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 ODF2Q5BJF6 829 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 ACBD5Q5T8D3 534 aaPredicted RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 TXNDC8Q6A555 127 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 CLEC20AQ6ZU45 233 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 CEP128Q6ZU80 1094 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 FAM183BPQ6ZVS7 135 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 BNIPLQ7Z465 357 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 PIGZQ86VD9 579 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 MON1AQ86VX9 555 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms