RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PCDHAC1Q9H158 963 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 NOL11Q9H8H0 719 aaKnown RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 CLK4Q9HAZ1 481 aaKnown RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 COQ3Q9NZJ6 369 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 AURKCQ9UQB9 309 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 NRP1O14786 923 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SNAI1O95863 264 aaPredicted RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 CPA3P15088 417 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ERCC2P18074 760 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 PGAM1P18669 254 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ALDH4A1P30038 563 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 IDH3AP50213 366 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 TKTL1P51854 596 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 CCNA1P78396 465 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 NIPAL4Q0D2K0 466 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SMU1Q2TAY7 513 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ZBTB49Q6ZSB9 765 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SPATA6LQ8N4H0 392 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 PCDH20Q8N6Y1 951 aaKnown RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 ZNF781Q8N8C0 355 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 DTX3Q8N9I9 347 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 B3GALNT2Q8NCR0 500 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ZFYVE19Q96K21 471 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SERPINI1Q99574 410 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 OSBPL11Q9BXB4 747 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 HIPK3Q9H422 1215 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ITM2CQ9NQX7 267 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 COPG2Q9UBF2 871 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 KLQ9UEF7 1012 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 UBQLN1Q9UMX0 589 aaKnown RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 RNF103-CHMP3A0A140T963 221 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 H3BNH8 94 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 AURKAO14965 403 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 PHGDHO43175 533 aaKnown RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 TMCC2O75069 709 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 FYNP06241 537 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 TAF6P49848 677 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 PLCL1Q15111 1095 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SLC25A52Q3SY17 297 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ARHGAP17Q68EM7 881 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SMYD5Q6GMV2 418 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ARCQ7LC44 396 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 UNC93AQ86WB7 457 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SNX31Q8N9S9 440 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 CENPIQ92674 756 aaPredicted RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 SLC10A4Q96EP9 437 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SORT1Q99523 831 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ULBP1Q9BZM6 244 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 WDR55Q9H6Y2 383 aaPredicted RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 CHRAC1Q9NRG0 131 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 MORF4L1Q9UBU8 362 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SLC39A10Q9ULF5 831 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 USP3Q9Y6I4 520 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 A0A096LPK6 155 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 MEIS3P2A8K0S8 358 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 MAN1A2O60476 641 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 LTFP02788 710 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 MMP3P08254 477 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 NCAM1P13591 858 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 AOC1P19801 751 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 GP5P40197 560 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 TPI1P60174 286 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 PAN2Q504Q3 1202 aaKnown RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 BORAQ6PGQ7 559 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 NAPRTQ6XQN6 538 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 NT5DC4Q86YG4 428 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ZDHHC17Q8IUH5 632 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SLC38A6Q8IZM9 456 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 FEM1CQ96JP0 617 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 KLHL32Q96NJ5 620 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 CGREF1Q99674 301 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 C11orf84Q9BUA3 381 aaPredicted RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 RHOBTB2Q9BYZ6 727 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 IARS2Q9NSE4 1012 aaKnown RBP9.44□□□□□ -0.9
SMG6-202ENST00000354901 PNPLA3Q9NST1 481 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 DCDC2Q9UHG0 476 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 VANGL2Q9ULK5 521 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 ERGIC3Q9Y282 383 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 SHROOM3Q8TF72 1996 aa9.44□□□□□ -0.9
SMG6-202ENST00000354901 A0A087WXM4 84 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 YJEFN3A6XGL0 299 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ZBTB24O43167 697 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 TIPRLO75663 272 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 DLGAP3O95886 979 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 IL1BP01584 269 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 CHRNGP07510 517 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 USP17L7P0C7H9 530 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 PIM1P11309 404 aaPredicted RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 SERPINB1P30740 379 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 IFNA8P32881 189 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 TRPC1P48995 793 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 ABCE1P61221 599 aaKnown RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 PHC1P78364 1004 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 DGKDQ16760 1214 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 MGAT5BQ3V5L5 792 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 CCDC58Q4VC31 144 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 SLC9B1Q4ZJI4 515 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 TWF2Q6IBS0 349 aaKnown RBP9.43□□□□□ -0.9
SMG6-202ENST00000354901 FSTL4Q6MZW2 842 aa9.43□□□□□ -0.9
SMG6-202ENST00000354901 C4orf22Q6V702 233 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms