RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 LYSMD3Q7Z3D4 306 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 PPTC7Q8NI37 304 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 GRIN3AQ8TCU5 1115 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 CALML6Q8TD86 181 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 TSPEARQ8WU66 669 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 CANT1Q8WVQ1 401 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 L3HYPDHQ96EM0 354 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 COX4I2Q96KJ9 171 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 OMDQ99983 421 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 LIN28AQ9H9Z2 209 aaKnown RBP11.49□□□□□ -0.57
CAPN9-202ENST00000354537 CXorf21Q9HAI6 301 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 CDHR5Q9HBB8 845 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 CNGB3Q9NQW8 809 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 ACTR3BQ9P1U1 418 aa11.49□□□□□ -0.57
CAPN9-202ENST00000354537 RGS17Q9UGC6 210 aaPredicted RBP11.49□□□□□ -0.57
CAPN9-202ENST00000354537 MYO18AQ92614 2054 aaKnown RBP11.49□□□□□ -0.57
CAPN9-202ENST00000354537 DHRS12A0PJE2 317 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 GOLGA8TH3BQL2 631 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PGK2P07205 417 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 HNRNPLP14866 589 aaKnown RBP eCLIP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 CPB1P15086 417 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 CKMT2P17540 419 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 GPX3P22352 226 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 ARNTP27540 789 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 AXLP30530 894 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 HTR7P34969 479 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 STT3AP46977 705 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 SLC7A2P52569 658 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 DAOAP59103 153 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 C1QTNF8P60827 252 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PDCD4Q53EL6 469 aaKnown RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 TBCELQ5QJ74 424 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 BTBD8Q5XKL5 378 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 DENND5AQ6IQ26 1287 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 NOTUMQ6P988 496 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 ABRAXAS1Q6UWZ7 409 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 CYP2R1Q6VVX0 501 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 DENND6AQ8IWF6 608 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 RNF168Q8IYW5 571 aaPredicted RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 LEMD2Q8NC56 503 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 NDRG1Q92597 394 aaKnown RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 CXCL16Q9H2A7 254 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 MROH8Q9H579 483 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 SMOXQ9NWM0 555 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 FBXO5Q9UKT4 447 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 EVPLQ92817 2033 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 SYNJ2BP-COX16A0A087WUM0 186 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 TTC24A2A3L6 582 aaPredicted RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 ZNF839A8K0R7 811 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 SPTLC1O15269 473 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PEX10O60683 326 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 USP2O75604 605 aaPredicted RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 UMPSP11172 480 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PORP16435 677 aaPredicted RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 FGFR3P22607 806 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PSMA4P25789 261 aaKnown RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 ADRA1AP35348 466 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 SLC1A2P43004 574 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 MRPL19P49406 292 aaKnown RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 CXCR3P49682 368 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PHEXP78562 749 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 NFKB2Q00653 900 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PLOD1Q02809 727 aaPredicted RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 CTBP1Q13363 440 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 C16orf72Q14CZ0 275 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 MOGQ16653 247 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 SLC44A4Q53GD3 710 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 CLEC20AQ6ZU45 233 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PAQR9Q6ZVX9 377 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 FASTKD5Q7L8L6 764 aaKnown RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 ZNF786Q8N393 782 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 CBR4Q8N4T8 237 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 RNF169Q8NCN4 708 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PDPRQ8NCN5 879 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PAPD5Q8NDF8 572 aaKnown RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 MYRFLQ96LU7 910 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 PPP1R16BQ96T49 567 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 COLEC11Q9BWP8 271 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 RPF2Q9H7B2 306 aaKnown RBP11.48□□□□□ -0.57
CAPN9-202ENST00000354537 GID8Q9NWU2 228 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 COX16Q9P0S2 106 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 EBF1Q9UH73 591 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 FZD1Q9UP38 647 aa11.48□□□□□ -0.57
CAPN9-202ENST00000354537 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
CAPN9-202ENST00000354537 SOBPA7XYQ1 873 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 MATN4O95460 622 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 FGF4P08620 206 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 INHBBP09529 407 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 ATP6V1B2P21281 511 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 GRIA3P42263 894 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 LEPRP48357 1165 aaKnown RBP11.47□□□□□ -0.57
CAPN9-202ENST00000354537 CCT8P50990 548 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 CDH15P55291 814 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 PRAMEF18Q5VWM3 479 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 ESRP1Q6NXG1 681 aaKnown RBP11.47□□□□□ -0.57
CAPN9-202ENST00000354537 CLYBLQ8N0X4 340 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 TRPV3Q8NET8 790 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 GIPC3Q8TF64 312 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms