RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SERPINH1P50454 418 aaKnown RBP11.33□□□□□ -0.6
RTN3-204ENST00000354497 HK3P52790 923 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 DNM1Q05193 864 aaKnown RBP11.33□□□□□ -0.6
RTN3-204ENST00000354497 EIF4EBP2Q13542 120 aaPredicted RBP11.33□□□□□ -0.6
RTN3-204ENST00000354497 ARHGEF7Q14155 803 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 RBBP5Q15291 538 aaKnown RBP11.33□□□□□ -0.6
RTN3-204ENST00000354497 LRRC31Q6UY01 552 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 ATCAYQ86WG3 371 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 PCDH20Q8N6Y1 951 aaKnown RBP11.33□□□□□ -0.6
RTN3-204ENST00000354497 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 ARMC2Q8NEN0 867 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 ASB12Q8WXK4 309 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 SLC35C1Q96A29 364 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 RAB7BQ96AH8 199 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 CENPTQ96BT3 561 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 SLC2A13Q96QE2 648 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 WRAP53Q9BUR4 548 aaKnown RBP11.33□□□□□ -0.6
RTN3-204ENST00000354497 CEP44Q9C0F1 390 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 SEMA6CQ9H3T2 930 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 MPP6Q9NZW5 540 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 PLEKHB1Q9UF11 243 aaPredicted RBP11.33□□□□□ -0.6
RTN3-204ENST00000354497 ZDHHC9Q9Y397 364 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 RP1P56715 2156 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 B4DGG1 531 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 KRIT1O00522 736 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 ZNF821O75541 412 aaPredicted RBP11.32□□□□□ -0.6
RTN3-204ENST00000354497 TM7SF2O76062 418 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 UGT2B4P06133 528 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 ZSCAN22P10073 491 aaPredicted RBP11.32□□□□□ -0.6
RTN3-204ENST00000354497 PRKAR1AP10644 381 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 CCL4P13236 92 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 LIFP15018 202 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 HTR1BP28222 390 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 ZFP36L1Q07352 338 aaKnown RBP11.32□□□□□ -0.6
RTN3-204ENST00000354497 CETN1Q12798 172 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 PDCLQ13371 301 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 C16orf72Q14CZ0 275 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 IRF4Q15306 451 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 ALG11Q2TAA5 492 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 AMZ1Q400G9 498 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 ZNF805Q5CZA5 627 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 LVRNQ6Q4G3 990 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 TMEM110Q86TL2 294 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 SETD3Q86TU7 594 aaPredicted RBP11.32□□□□□ -0.6
RTN3-204ENST00000354497 SPNS2Q8IVW8 549 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 C17orf53Q8N3J3 647 aaPredicted RBP11.32□□□□□ -0.6
RTN3-204ENST00000354497 DRAXINQ8NBI3 349 aaPredicted RBP11.32□□□□□ -0.6
RTN3-204ENST00000354497 MAGEC3Q8TD91 643 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 STK32AQ8WU08 396 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 TKTL2Q9H0I9 626 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 METTL14Q9HCE5 456 aaKnown RBP11.32□□□□□ -0.6
RTN3-204ENST00000354497 SPATS2LQ9NUQ6 558 aaKnown RBP11.32□□□□□ -0.6
RTN3-204ENST00000354497 KLQ9UEF7 1012 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 MCM8Q9UJA3 840 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 TUBD1Q9UJT1 453 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 ADAM21Q9UKJ8 722 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 ACTL7AQ9Y615 435 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 AHCTF1Q8WYP5 2266 aa11.32□□□□□ -0.6
RTN3-204ENST00000354497 TRPM6Q9BX84 2022 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 MTSS1O43312 755 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 HSF2BPO75031 334 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 SRGAP2O75044 1071 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 AGFG2O95081 481 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 CMA1P23946 247 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 GNA15P30679 374 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 NDUFA8P51970 172 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 SRP54P61011 504 aaKnown RBP11.31□□□□□ -0.6
RTN3-204ENST00000354497 FKBP3Q00688 224 aaKnown RBP11.31□□□□□ -0.6
RTN3-204ENST00000354497 C5orf22Q49AR2 442 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 CCDC40Q4G0X9 1142 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 EFHC1Q5JVL4 640 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 WLSQ5T9L3 541 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 GBP6Q6ZN66 633 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 RINLQ6ZS11 566 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 FAM183BPQ6ZVS7 135 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 TMPRSS9Q7Z410 1059 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 SPRED1Q7Z699 444 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 TAF8Q7Z7C8 310 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 TTC7BQ86TV6 843 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 PASD1Q8IV76 773 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 TP53I13Q8NBR0 393 aaPredicted RBP11.31□□□□□ -0.6
RTN3-204ENST00000354497 RCBTB1Q8NDN9 531 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 NKD1Q969G9 470 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 ARHGEF26Q96DR7 871 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 KLHL32Q96NJ5 620 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 WDCPQ9H6R7 721 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 RDH14Q9HBH5 336 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 LRIT1Q9P2V4 623 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 COQ6Q9Y2Z9 468 aa11.31□□□□□ -0.6
RTN3-204ENST00000354497 TLN1Q9Y490 2541 aaKnown RBP11.31□□□□□ -0.6
RTN3-204ENST00000354497 TRIM49BA6NDI0 452 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 ZNF891A8MT65 544 aaPredicted RBP11.3□□□□□ -0.6
RTN3-204ENST00000354497 DAB1O75553 588 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 TNFP01375 233 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 GLB1P16278 677 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 ITIH2P19823 946 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 SULT1E1P49888 294 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 ARF5P84085 180 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 ANKRD40Q6AI12 368 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms