RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 GOLGA8QA0A0J9YX86 632 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 LINC01553A4QN01 128 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 GOLGA8OA6NCC3 632 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF840PA6NDX5 716 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 GOLGA8NF8WBI6 632 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SCAMP3O14828 347 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 AP1G1O43747 822 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TLL1O43897 1013 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TLR5O60602 858 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CNTN5O94779 1100 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 HSPA4LO95757 839 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 URODP06132 367 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SMIM18P0DKX4 95 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CTSAP10619 480 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 GLDCP23378 1020 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PRDX6P30041 224 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 MAGEA12P43365 314 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TPI1P60174 286 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 IRF9Q00978 393 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SMARCB1Q12824 385 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 NAB1Q13506 487 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 FSCBQ5H9T9 825 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PPM1LQ5SGD2 360 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 NADSYN1Q6IA69 706 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 LILRA6Q6PI73 481 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SDCCAG8Q86SQ7 713 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PQLC1Q8N2U9 271 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 DPF3Q92784 378 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 IGSF8Q969P0 613 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ISL2Q96A47 359 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PPP1R36Q96LQ0 422 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 RAD9AQ99638 391 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 RBBP8Q99708 897 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CPNE1Q99829 537 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 NAT9Q9BTE0 207 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 OSBPL2Q9H1P3 480 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CAB39LQ9H9S4 337 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ACSS2Q9NR19 701 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 EIF2B3Q9NR50 452 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TLR8Q9NR97 1041 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 MRPL17Q9NRX2 175 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 UBAP1Q9NZ09 502 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SEPT10Q9P0V9 454 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 RCOR3Q9P2K3 495 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TLR6Q9Y2C9 796 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 HACD1B0YJ81 288 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 KCNK1O00180 336 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 AIM2O14862 343 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 COCHO43405 550 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 USP12O75317 370 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CXCL14O95715 111 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 IGLV3-27P01718 113 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 KLKB1P03952 638 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CCR1P32246 355 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CA8P35219 290 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 MSX2P35548 267 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ABCG1P45844 678 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 NUDT2P50583 147 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 MLLT6P55198 1093 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TBX4P57082 545 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PLD1Q13393 1074 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PPP2R5DQ14738 602 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ALFQ53S48 1182 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 MS4A13Q5J8X5 152 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 GRTP1Q5TC63 336 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 DNAJB7Q7Z6W7 309 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 STRA8Q7Z7C7 330 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SPATA24Q86W54 205 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CIR1Q86X95 450 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ARHGAP12Q8IWW6 846 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF567Q8N184 647 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TDRD5Q8NAT2 981 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CCNYQ8ND76 341 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SPPL3Q8TCT6 385 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 NMD3Q96D46 503 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 DCUN1D1Q96GG9 259 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 NOL6Q9H6R4 1146 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 WDR55Q9H6Y2 383 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 IL21Q9HBE4 155 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TCF7L2Q9NQB0 619 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 MARCH2Q9P0N8 246 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 STK39Q9UEW8 545 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PSMD13Q9UNM6 376 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 DTNAQ9Y4J8 743 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 A0A096LPK6 155 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SMIM31A0A1B0GVY4 71 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SLC12A8A0AV02 714 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 DNAJA2O60884 412 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 CHRNGP07510 517 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 BMPR1AP36894 532 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 GARSP41250 739 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 HCAR3P49019 387 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TUFMP49411 452 aaKnown RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 AIF1P55008 147 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 PDCD2Q16342 344 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ARL13BQ3SXY8 428 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 METTL21CQ5VZV1 264 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TPGS2Q68CL5 300 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 RWDD4Q6NW29 188 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms