RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GPC4O75487 556 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 HSPA1AP0DMV8 641 aaKnown RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 HSPA1BP0DMV9 641 aaKnown RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 RPL26P61254 145 aaKnown RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 EIF4EBP2Q13542 120 aaPredicted RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 MYO1HQ8N1T3 1032 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 NT5MQ9NPB1 228 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 ENTPD7Q9NQZ7 604 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 MARCH4Q9P2E8 410 aaPredicted RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 IPO11Q9UI26 975 aaKnown RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 MYADML2A6NDP7 307 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 H3BSA7 217 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 PLOD2O00469 737 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 IGLV3-25P01717 112 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 CKMT2P17540 419 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 PCSK6P29122 969 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 POU4F1Q01851 419 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 FAM83EQ2M2I3 478 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 MTX3Q5HYI7 312 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 OR6P1Q8NGX9 317 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 ASB9Q96DX5 294 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 CIB1Q99828 191 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 TRIM8Q9BZR9 551 aa18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 SENP6Q9GZR1 1112 aaPredicted RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 NOL6Q9H6R4 1146 aaKnown RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 NOL11Q9H8H0 719 aaKnown RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 AGO3Q9H9G7 860 aaKnown RBP18.2■□□□□ 0.5
PTP4A3-202ENST00000349124 UNCXA6NJT0 531 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 AP3B1O00203 1094 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 SUPT7LO94864 414 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 FAM58BPP0C7Q3 252 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 PCSK1P29120 753 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 DNAJB13P59910 316 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 PFKPQ01813 784 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 LAMB3Q13751 1172 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 FBXO48Q5FWF7 155 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 SCD5Q86SK9 330 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 RYBPQ8N488 228 aaPredicted RBP18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 OR52K2Q8NGK3 314 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 OR13J1Q8NGT2 312 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 GTF3C2Q8WUA4 911 aaPredicted RBP18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 TMIGD2Q96BF3 282 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 SLC38A7Q9NVC3 462 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 OSER1Q9NX31 292 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 TRAF6Q9Y4K3 522 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 HS3ST4Q9Y661 456 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 PDCD11Q14690 1871 aaKnown RBP18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 A0A087X1B8 175 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 SLC4A1P02730 911 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 HAPLN1P10915 354 aaPredicted RBP18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 CD86P42081 329 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 INHBCP55103 352 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 SLC10A7Q0GE19 358 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 HECTD2Q5U5R9 776 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 KIAA0930Q6ICG6 404 aaPredicted RBP18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 FAM171BQ6P995 826 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 HERC6Q8IVU3 1022 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 DLG3Q92796 817 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 TSPAN18Q96SJ8 248 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 UNC93B1Q9H1C4 597 aa18.19■□□□□ 0.5
PTP4A3-202ENST00000349124 E9PAM4 449 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 TNFAIP8O95379 198 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 CAPNS1P04632 268 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 LTA4HP09960 611 aaKnown RBP18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 DSC2Q02487 901 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 MANEALQ5VSG8 457 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 HMBOX1Q6NT76 420 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 CD300LGQ6UXG3 332 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 LCA5Q86VQ0 697 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 FUNDC1Q8IVP5 155 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 AHI1Q8N157 1196 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 HDAC10Q969S8 669 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 HIC2Q96JB3 615 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 RBM38Q9H0Z9 239 aaKnown RBP18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 GSTO2Q9H4Y5 243 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 MEAF6Q9HAF1 191 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 EPS15L1Q9UBC2 864 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 BCAP29Q9UHQ4 241 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 TRIM24O15164 1050 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 TIPRLO75663 272 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 SIX3O95343 332 aaPredicted RBP18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 DNAJB2P25686 324 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 SLC5A3P53794 718 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 KDELC1Q6UW63 502 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 USP50Q70EL3 339 aaPredicted RBP18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 RETREG3Q86VR2 466 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 PABPC5Q96DU9 382 aaKnown RBP18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 SLC2A11Q9BYW1 496 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 ZNF696Q9H7X3 374 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 VWA7Q9Y334 891 aa18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 HEMK1Q9Y5R4 338 aaPredicted RBP18.18■□□□□ 0.5
PTP4A3-202ENST00000349124 ZNF839A8K0R7 811 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 MRASO14807 208 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 CNTN5O94779 1100 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 PEX11BO96011 259 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 CHRNA1P02708 482 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 SNRPB2P08579 225 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 FAM163BP0C2L3 166 aa18.17■□□□□ 0.5
PTP4A3-202ENST00000349124 PAMP19021 973 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms