RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SLIT1O75093 1534 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 ME2P23368 584 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 HNF4AP41235 474 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 NAB1Q13506 487 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 CCNG2Q16589 344 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 HES5Q5TA89 166 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 FGD2Q7Z6J4 655 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 CERS5Q8N5B7 392 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 TKTL2Q9H0I9 626 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 TBC1D13Q9NVG8 400 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 GDAP2Q9NXN4 497 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 ARMCX1Q9P291 453 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 DRG1Q9Y295 367 aaKnown RBP11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 ZNF510Q9Y2H8 683 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 NFASCO94856 1347 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 GJB1P08034 283 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 YBX3P16989 372 aaKnown RBP eCLIP11.15□□□□□ -0.622e-7■■□□□ 12.5
SMARCE1-202ENST00000348513 PRMT9Q6P2P2 845 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 CATSPERGQ6ZRH7 1159 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 KIF18BQ86Y91 864 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 SERAC1Q96JX3 654 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 DUSP9Q99956 384 aaKnown RBP11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 SLC4A5Q9BY07 1137 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 MAN1C1Q9NR34 630 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 ADPRHL2Q9NX46 363 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 PADI4Q9UM07 663 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 SNX8Q9Y5X2 465 aa11.15□□□□□ -0.62
SMARCE1-202ENST00000348513 MGAT4DA6NG13 374 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 MAPTP10636 758 aaKnown RBP11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 ALADP13716 330 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 SRP54P61011 504 aaKnown RBP11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 ILF2Q12905 390 aaKnown RBP11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 PHKG1Q16816 387 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 POM121L1PQ3SYA9 428 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 TIMM50Q3ZCQ8 353 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 CELF3Q5SZQ8 465 aaKnown RBP11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 CHMP1BQ7LBR1 199 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 DHFR2Q86XF0 187 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 CENPLQ8N0S6 344 aaPredicted RBP11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 BIRC8Q96P09 236 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 ERMAPQ96PL5 475 aaPredicted RBP11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 LNPEPQ9UIQ6 1025 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 ACOT9Q9Y305 439 aa11.15□□□□□ -0.63
SMARCE1-202ENST00000348513 OR6C70A6NIJ9 312 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CES2O00748 559 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 ELK3P41970 407 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 LSM3P62310 102 aaKnown RBP11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 DDR2Q16832 855 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 FNDC3BQ53EP0 1204 aaKnown RBP11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 KAT5Q92993 513 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SALL3Q9BXA9 1300 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 C5orf60A6NFR6 353 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SERPINF2P08697 491 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CCNG1P51959 295 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 HK2P52789 917 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CYP4F2P78329 520 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CYP4F3Q08477 520 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 TRIM32Q13049 653 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 FIGNQ5HY92 759 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 WSCD1Q658N2 575 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 AADACL2Q6P093 401 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 ZNF410Q86VK4 478 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SLC26A11Q86WA9 606 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CDADC1Q9BWV3 514 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SEZ6LQ9BYH1 1024 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 ULBP1Q9BZM6 244 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CXorf21Q9HAI6 301 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 NKX1-2Q9UD57 310 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SORCS3Q9UPU3 1222 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 A0A0A6YYK5 440 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 ZNF682O95780 498 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 LTFP02788 710 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 MAGP20916 626 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 C6orf52Q5T4I8 152 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 HAGHLQ6PII5 290 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 MFSD7Q6UXD7 560 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SENP8Q96LD8 212 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CCDC3Q9BQI4 270 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 TMEM168Q9H0V1 697 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 VPS51Q9UID3 782 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 VWDEQ8N2E2 1590 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 H7C0S8 307 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 PRMT3O60678 531 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 PEX11AO75192 247 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 KDM4BO94953 1096 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 HMGCRP04035 888 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 NUDT7P0C024 238 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SMIM10L2AP0DMW4 78 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SMIM10L2BP0DMW5 78 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 GRK3P35626 688 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SGCGQ13326 291 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 GNA13Q14344 377 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 IQSEC1Q6DN90 963 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 GLT6D1Q7Z4J2 308 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 TMIEQ8NEW7 156 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms