RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SLC5A3P53794 718 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 DNAJB13P59910 316 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 SLC12A1Q13621 1099 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 BTG3Q14201 252 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 DCLRE1AQ6PJP8 1040 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 PIWIL4Q7Z3Z4 852 aaKnown RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 DHFR2Q86XF0 187 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 SIX6OS1Q8N1H7 587 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 OR2T34Q8NGX1 318 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 OR2T3Q8NH03 318 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 SLCO4A1Q96BD0 722 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 ROPN1LQ96C74 230 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 KCTD15Q96SI1 283 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 NPAS2Q99743 824 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 MRPL45Q9BRJ2 306 aaKnown RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 C11orf84Q9BUA3 381 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 C1orf50Q9BV19 199 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 MAGEE1Q9HCI5 957 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 KLK14Q9P0G3 267 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 ZDHHC2Q9UIJ5 367 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 PADI3Q9ULW8 664 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 A0A0U1RQF3 1178 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 A0A1B0GTW7 788 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 BBIP1A8MTZ0 92 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 H3BMQ9 156 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 STX16-NPEPL1H3BU86 382 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 FBP2O00757 339 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 THP07101 528 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 WARSP23381 471 aaKnown RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 MSX2P35548 267 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 LILRA4P59901 499 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 CRADDP78560 199 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 PRKCQQ04759 706 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 INPP5AQ14642 412 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 UGP2Q16851 508 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 GOLGA7BQ2TAP0 167 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 C16orf87Q6PH81 154 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 SLC26A9Q7LBE3 791 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 STRADAQ7RTN6 431 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 RNF148Q8N7C7 305 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 MINDY2Q8NBR6 621 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 APPL2Q8NEU8 664 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 SEPT8Q92599 483 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 VPS39Q96JC1 886 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 SLC45A3Q96JT2 553 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 COG8Q96MW5 612 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 SLC29A1Q99808 456 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 C1QTNF1Q9BXJ1 281 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 UNKQ9C0B0 810 aaKnown RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 SEMA6AQ9H2E6 1030 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 AGO3Q9H9G7 860 aaKnown RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 INIPQ9NRY2 104 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 CCM2LQ9NUG4 571 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-202ENST00000347617 CACNA2D2Q9NY47 1150 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 TMEM181Q9P2C4 612 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 CROTQ9UKG9 612 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 NOD1Q9Y239 953 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 USP3Q9Y6I4 520 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 CROCCQ5TZA2 2017 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 MYO18AQ92614 2054 aaKnown RBP15.97■□□□□ 0.15
HMGA1-202ENST00000347617 E7ENX8 843 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 SDHDO14521 159 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 HUS1O60921 280 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 MAP3K6O95382 1288 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 AP2A1O95782 977 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 AMHP03971 560 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 INHAP05111 366 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 PFKMP08237 780 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 CDH3P22223 829 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 GRK4P32298 578 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 GNL1P36915 607 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-202ENST00000347617 TMBIM6P55061 237 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 SOX4Q06945 474 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-202ENST00000347617 TUBA3CQ13748 450 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 MAP7D1Q3KQU3 841 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 REP15Q6BDI9 236 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 HMBOX1Q6NT76 420 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 ABRAXAS1Q6UWZ7 409 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 FRA10AC1Q70Z53 315 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 PDZD4Q76G19 769 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-202ENST00000347617 CENPSQ8N2Z9 138 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 ZNF786Q8N393 782 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 TMEM130Q8N3G9 435 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 KDM1BQ8NB78 822 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 KHSRPQ92945 711 aaKnown RBP eCLIP15.97■□□□□ 0.15
HMGA1-202ENST00000347617 PPWD1Q96BP3 646 aaKnown RBP15.97■□□□□ 0.15
HMGA1-202ENST00000347617 CCDC126Q96EE4 140 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 P2RY11Q96G91 374 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 TNIP3Q96KP6 325 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 FCRL3Q96P31 734 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-202ENST00000347617 CIB1Q99828 191 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 RHOBTB2Q9BYZ6 727 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 MUC13Q9H3R2 512 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 RHOJQ9H4E5 214 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 CASS4Q9NQ75 786 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 VANGL2Q9ULK5 521 aa15.97■□□□□ 0.15
HMGA1-202ENST00000347617 FNDC1Q4ZHG4 1894 aaPredicted RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 TRIM43BA6NCK2 446 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 TMEM247A6NEH6 219 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 INPPL1O15357 1258 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms