RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 THOC1Q96FV9 657 aaKnown RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 ATXN7L3BQ96GX2 97 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 FSD1LQ9BXM9 530 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 PITPNM3Q9BZ71 974 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 ENTPD7Q9NQZ7 604 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 IARS2Q9NSE4 1012 aaKnown RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 C20orf96Q9NUD7 363 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 IRAK4Q9NWZ3 460 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 AGO1Q9UL18 857 aaKnown RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 PLLPQ9Y342 182 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 RANBP2P49792 3224 aaKnown RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 NRG2O14511 850 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 MUSKO15146 869 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 EFSO43281 561 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PRAMEF11O60813 436 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 MBL2P11226 248 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ALADP13716 330 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 GLDCP23378 1020 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 CNTFP26441 200 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PPM1AP35813 382 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 GP5P40197 560 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 YBEYP58557 167 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ZXDBP98169 803 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 MPP3Q13368 585 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 CCINQ13939 588 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 FRG1Q14331 258 aaKnown RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ITIH4Q14624 930 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 LBRQ14739 615 aaKnown RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 SPRED3Q2MJR0 410 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PCID2Q5JVF3 399 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 SAMD5Q5TGI4 173 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 TXNDC8Q6A555 127 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PKN3Q6P5Z2 889 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 SPATA21Q7Z572 469 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 STRA8Q7Z7C7 330 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 KCNMB4Q86W47 210 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 FIBCD1Q8N539 461 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ARRDC2Q8TBH0 407 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 NSMCE1Q8WV22 266 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 BADQ92934 168 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 BHMTQ93088 406 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 CPNE1Q99829 537 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PDFQ9HBH1 243 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PRKAG2Q9UGJ0 569 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 SLC2A6Q9UGQ3 507 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 MCM8Q9UJA3 840 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PHTF1Q9UMS5 762 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 USP15Q9Y4E8 981 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ANKRD36A6QL64 1941 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 A0A1W2PP55 124 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 E2F8A0AVK6 867 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 AP3B1O00203 1094 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 BNIP3LO60238 219 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 FGBP02675 491 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 CTSAP10619 480 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 HOXD9P28356 352 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 CDH4P55283 916 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 HTRA4P83105 476 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 GNA12Q03113 381 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PDE1CQ14123 709 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 DBN1Q16643 649 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 CTC1Q2NKJ3 1217 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PPM1JQ5JR12 505 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 RABGAP1LQ5R372 815 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 GRTP1Q5TC63 336 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ESRP1Q6NXG1 681 aaKnown RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ZNF449Q6P9G9 518 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ARL14EPQ8N8R7 260 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ANKS4BQ8N8V4 417 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 PPP1R2P1Q96PQ5 205 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 HHIPQ96QV1 700 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 SLC30A3Q99726 388 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 SPON2Q9BUD6 331 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 MECRQ9BV79 373 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 IQCGQ9H095 443 aaKnown RBP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 VPS11Q9H270 941 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 RXFP1Q9HBX9 757 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ATP13A1Q9HD20 1204 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.32□□□□□ -0.92
ATG4A-202ENST00000345734 TXNDC16Q9P2K2 825 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 TCAF1Q9Y4C2 921 aa9.32□□□□□ -0.92
ATG4A-202ENST00000345734 ATXN2Q99700 1313 aaKnown RBP9.31□□□□□ -0.92
ATG4A-202ENST00000345734 MYOFQ9NZM1 2061 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.31□□□□□ -0.92
ATG4A-202ENST00000345734 LCHNA4D1U4 455 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 METTL12A8MUP2 240 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 EDF1O60869 148 aaKnown RBP9.31□□□□□ -0.92
ATG4A-202ENST00000345734 KIAA0754O94854 1291 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 CXCL14O95715 111 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 EN2P19622 333 aaPredicted RBP9.31□□□□□ -0.92
ATG4A-202ENST00000345734 BGNP21810 368 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 CRHR1P34998 444 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 RPS6KA3P51812 740 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 CYP4F8P98187 520 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 PDE1BQ01064 536 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 TNK2Q07912 1038 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 SEPT6Q14141 434 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 UBAP2LQ14157 1087 aaKnown RBP9.31□□□□□ -0.92
ATG4A-202ENST00000345734 ADGRF1Q5T601 910 aa9.31□□□□□ -0.92
ATG4A-202ENST00000345734 IL31Q6EBC2 164 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms