RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 GOLGA6L10A6NI86 522 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 FAM159BA6NKW6 160 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 SPECC1L-ADORA2AF8WAN1 911 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 SLC8A1P32418 973 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 SLCO1A2P46721 670 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 SEPT6Q14141 434 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 EFTUD2Q15029 972 aaKnown RBP eCLIP16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 FNDC3BQ53EP0 1204 aaKnown RBP16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 HSP90B2PQ58FF3 399 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 UNC5BQ8IZJ1 945 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 BRSK1Q8TDC3 778 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 BLOC1S5Q8TDH9 187 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 DNASE1L2Q92874 299 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 ARL8AQ96BM9 186 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 ECHDC3Q96DC8 303 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 PKNOX2Q96KN3 472 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 HEPHQ9BQS7 1158 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 TMEM245Q9H330 911 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 MTG2Q9H4K7 406 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 SUV39H2Q9H5I1 410 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 PPCSQ9HAB8 311 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 SMYD2Q9NRG4 433 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 TREX1Q9NSU2 369 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 VPS18Q9P253 973 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 THAP10Q9P2Z0 257 aaPredicted RBP16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 SLC24A2Q9UI40 661 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 STARD13Q9Y3M8 1113 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 SPO11Q9Y5K1 396 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 WASF2Q9Y6W5 498 aa16.44■□□□□ 0.22
CEACAM1-202ENST00000344391 MROH6A6NGR9 719 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 POC1B-GALNT4F8VUJ3 575 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 H3BQF6 201 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 LDB2O43679 373 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 PIAS1O75925 651 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 PAPSS2O95340 614 aaPredicted RBP16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 PRKCGP05129 697 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 ASGR2P07307 311 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 PIRTP0C851 137 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 CTHP32929 405 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 GRIA4P48058 902 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 LAMB3Q13751 1172 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 HNRNPA1L2Q32P51 320 aaKnown RBP16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 PUS10Q3MIT2 529 aaKnown RBP16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 TSTD2Q5T7W7 516 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 ESRP1Q6NXG1 681 aaKnown RBP16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 ZNF449Q6P9G9 518 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 TXNDC11Q6PKC3 985 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 NLRP9Q7RTR0 991 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 TDRPQ86YL5 185 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 ZNF366Q8N895 744 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 CERS2Q96G23 380 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 ZNF641Q96N77 438 aaPredicted RBP16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 SMIM14Q96QK8 99 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 DHRS4Q9BTZ2 278 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 EURLQ9NYK6 297 aa16.43■□□□□ 0.22
CEACAM1-202ENST00000344391 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.43■□□□□ 0.222e-8■■■□□ 16
CEACAM1-202ENST00000344391 CCDC78A2IDD5 438 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 ANTXRLA6NF34 631 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 CXorf49A8MYA2 514 aaPredicted RBP16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 CDH16O75309 829 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 BMP1P13497 986 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 TNFRSF4P43489 277 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 EPHB1P54762 984 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 RASA2Q15283 850 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 CNGA3Q16281 694 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 TTMPQ5BVD1 217 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 GDPD4Q6W3E5 623 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 ZSWIM9Q86XI8 627 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 MDGA1Q8NFP4 955 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 SPOCK2Q92563 424 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 PGM2Q96G03 612 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 PAFAH2Q99487 392 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 C8orf33Q9H7E9 229 aaPredicted RBP16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 SLC2A6Q9UGQ3 507 aa16.42■□□□□ 0.22
CEACAM1-202ENST00000344391 A0A0J9YYE9 177 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 EDDM13A0A1B0GTR0 161 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 GOLGA8KD6RF30 607 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 TRBC1P01850 177 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 UGT2B4P06133 528 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 HLA-EP13747 358 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 HNRNPLP14866 589 aaKnown RBP eCLIP16.41■□□□□ 0.222e-8■□□□□ 8.9
CEACAM1-202ENST00000344391 IL9P15248 144 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 IL12RB1P42701 662 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 MGAT5Q09328 741 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 EGFLAMQ63HQ2 1017 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 RALGPS2Q86X27 583 aaPredicted RBP16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 LRRC6Q86X45 466 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 RIBC1Q8N443 379 aaPredicted RBP16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 SLC44A1Q8WWI5 657 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 EZH1Q92800 747 aaPredicted RBP16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 PEX13Q92968 403 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 MRRFQ96E11 262 aaKnown RBP16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 LRIG1Q96JA1 1093 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 CENPHQ9H3R5 247 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 HEBP1Q9NRV9 189 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 HACD3Q9P035 362 aa16.41■□□□□ 0.22
CEACAM1-202ENST00000344391 CTNNAL1Q9UBT7 734 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms