RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 MINDY1Q8N5J2 469 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 NETO2Q8NC67 525 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 FATE1Q969F0 183 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 AZIN2Q96A70 460 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 CELF6Q96J87 481 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 PPP1R2P1Q96PQ5 205 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 PRMT1Q99873 361 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 GTPBP2Q9BX10 602 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 NACA2Q9H009 215 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 ACSS3Q9H6R3 686 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 ZDHHC4Q9NPG8 344 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 EURLQ9NYK6 297 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 VANGL2Q9ULK5 521 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 CHMP2BQ9UQN3 213 aa13.67□□□□□ -0.22
HERPUD1-202ENST00000344114 PTPRBP23467 1997 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 DRGXA6NNA5 263 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 KCNK1O00180 336 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 DFFAO00273 331 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 ARHGAP33O14559 1287 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 PSMD3O43242 534 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 GJB3O75712 270 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 HMBSP08397 361 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 SLCO1A2P46721 670 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 MAPKAPK2P49137 400 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 RPL6Q02878 288 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 ANO4Q32M45 955 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 C5orf22Q49AR2 442 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 HP1BP3Q5SSJ5 553 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 RAP1GAP2Q684P5 730 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 LRRC8BQ6P9F7 803 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 ETFBKMTQ8IXQ9 262 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 PGBD3Q8N328 593 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 TEKT5Q96M29 485 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 CAPS2Q9BXY5 557 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC39A8Q9C0K1 460 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 CFAP97Q9P2B7 532 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 TBC1D14Q9P2M4 693 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 RSPH14Q9UHP6 348 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 FREM2Q5SZK8 3169 aa13.66□□□□□ -0.22
HERPUD1-202ENST00000344114 IGHV1OR15-9A0A0B4J2B8 117 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 F5H5T6 163 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 SCAMP3O14828 347 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 MATN3O15232 486 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 COCHO43405 550 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 ACSL4O60488 711 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 MAFKO60675 156 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 AP2A1O95782 977 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 CPP00450 1065 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 TACR2P21452 398 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 STX2P32856 288 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 MMP13P45452 471 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC11A2P49281 568 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 HARS2P49590 506 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 ZBTB17Q13105 803 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC14A1Q13336 389 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 PRPSAP1Q14558 356 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 SOWAHCQ53LP3 525 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 SYCP2LQ5T4T6 812 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 FBXL22Q6P050 247 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 C3orf62Q6ZUJ4 267 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 TRMT11Q7Z4G4 463 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC41A1Q8IVJ1 513 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 KLHDC8BQ8IXV7 354 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 ADAMTS14Q8WXS8 1223 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 IL12RB2Q99665 862 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 CEP41Q9BYV8 373 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 CD248Q9HCU0 757 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 SMPD4Q9NXE4 827 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 MPP6Q9NZW5 540 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 PSMC3IPQ9P2W1 217 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 HCN2Q9UL51 889 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 ACTL7BQ9Y614 415 aa13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 ANKRD11Q6UB99 2663 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-202ENST00000344114 E2F8A0AVK6 867 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 AP3B1O00203 1094 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 SUN1O94901 812 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 LATS1O95835 1130 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 SYPP08247 313 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 NFKB1P19838 968 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 SSTR1P30872 391 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 ATP1A2P50993 1020 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 GEMIN4P57678 1058 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 RABGAP1LQ5R372 815 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 LY6G5CQ5SRR4 150 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 NADSYN1Q6IA69 706 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 CAPN12Q6ZSI9 719 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 PDZD3Q86UT5 571 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 DEFB119Q8N690 84 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF513Q8N8E2 541 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 OR2I1PQ8NGU4 316 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 FBF1Q8TES7 1133 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 MAML1Q92585 1016 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms