RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 C17orf82Q86X59 251 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 OR4C6Q8NH72 309 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 FGF11Q92914 225 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PRPF18Q99633 342 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SELENOSQ9BQE4 189 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 TTYH3Q9C0H2 523 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 NEUROG2Q9H2A3 272 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 NCOA5Q9HCD5 579 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CASS4Q9NQ75 786 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 NCKAP1Q9Y2A7 1128 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PCDHB9Q9Y5E1 797 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SPTBN5Q9NRC6 3674 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 A0A1W2PRU2 124 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 LRRC72A6NJI9 287 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 NTN3O00634 580 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 HNRNPCL1O60812 293 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 RNASEH1O60930 286 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PSMG1O95456 288 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CYC1P08574 325 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 EPB42P16452 691 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 S100A5P33763 92 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 BRCC3P46736 316 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SF3A3Q12874 501 aaKnown RBP eCLIP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 HLTFQ14527 1009 aaKnown RBP eCLIP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 ANKDD1AQ495B1 522 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 TRIM61Q5EBN2 209 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 VASH1Q7L8A9 365 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CROCCP2Q86T23 111 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 FAM20CQ8IXL6 584 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CELF2-AS1Q8N7Q2 184 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 MDGA1Q8NFP4 955 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 RIN3Q8TB24 985 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PYROXD1Q8WU10 500 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PTCD2Q8WV60 388 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 LARP4BQ92615 738 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CCDC127Q96BQ5 260 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 TMEM109Q9BVC6 243 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 BOCQ9BWV1 1114 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 KLHL4Q9C0H6 718 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 MYLK2Q9H1R3 596 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SELENONQ9NZV5 590 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 KLHL14Q9P2G3 628 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 FTSJ1Q9UET6 329 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 ANAPC2Q9UJX6 822 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 TMEM114B3SHH9 223 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 TCP11X1B4DZS4 312 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 HGSO14964 777 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 OR6B1O95007 311 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 IGHEP01854 428 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CYBBP04839 570 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 KRT18P05783 430 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 T-ENOLP0DO92 83 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 EPHB2P29323 1055 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PRCPP42785 496 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 MXI1P50539 228 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 RPS3AP61247 264 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 RPL26P61254 145 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 NAA20P61599 178 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SP4Q02446 784 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 KCNC4Q03721 635 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 GRIK2Q13002 908 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 DUSP4Q13115 394 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SOWAHAQ2M3V2 549 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 KAZNQ674X7 775 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CGB2Q6NT52 195 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 BORAQ6PGQ7 559 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 BNIPLQ7Z465 357 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 DCLK2Q8N568 766 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 ACMSDQ8TDX5 336 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 TEFMQ96QE5 360 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 ECSITQ9BQ95 431 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PAAF1Q9BRP4 392 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CLMPQ9H6B4 373 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PLGRKTQ9HBL7 147 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SERTAD1Q9UHV2 236 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PCDHA13Q9Y5I0 950 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 MN1Q10571 1320 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 KMOO15229 486 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 VEGFDO43915 354 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 APOEP02649 317 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 PTPN1P18031 435 aaKnown RBP7.4□□□□□ -1.22
ZNF540-202ENST00000343599 MPSTP25325 297 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 RPIAP49247 311 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 BCAP31P51572 246 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 VWA3BQ502W6 1294 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 OGFOD3Q6PK18 319 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 PRR23BQ6ZRT6 265 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 VPS36Q86VN1 386 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 SLC41A1Q8IVJ1 513 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 C1orf127Q8N9H9 656 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 GOLM1Q8NBJ4 401 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 PIP4K2CQ8TBX8 421 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 C1orf74Q96LT6 269 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 RUSC1Q9BVN2 902 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 XYLT2Q9H1B5 865 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 TMEM60Q9H2L4 133 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 EPB41L4BQ9H329 900 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 CRISPLD1Q9H336 500 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 LATS2Q9NRM7 1088 aa7.4□□□□□ -1.22
ZNF540-202ENST00000343599 C6orf203Q9P0P8 240 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms