RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CEP97Q8IW35 865 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 GABPB2Q8TAK5 448 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-201ENST00000343483 HDAC10Q969S8 669 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 ACE2Q9BYF1 805 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-201ENST00000343483 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.72■□□□□ 0.59
HOXA9-201ENST00000343483 PRKAG2Q9UGJ0 569 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 STOML2Q9UJZ1 356 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 ARL5AQ9Y689 179 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 BUD23O43709 281 aaKnown RBP18.71■□□□□ 0.59
HOXA9-201ENST00000343483 EPOP01588 193 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 LRG1P02750 347 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 CSRP3P50461 194 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 ARSDP51689 593 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 RAB10P61026 200 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 RFTN1Q14699 578 aaPredicted RBP18.71■□□□□ 0.59
HOXA9-201ENST00000343483 CNSTQ6PJW8 725 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 LINGO4Q6UY18 593 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 CHRDL2Q6WN34 429 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 KIAA0408Q6ZU52 694 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 MAB21L3Q8N8X9 362 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 ADAMTS19Q8TE59 1207 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 RILPQ96NA2 401 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 STK39Q9UEW8 545 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 MCM8Q9UJA3 840 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 RPL26L1Q9UNX3 145 aaKnown RBP18.71■□□□□ 0.59
HOXA9-201ENST00000343483 SSX2IPQ9Y2D8 614 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 DNAJC16Q9Y2G8 782 aa18.71■□□□□ 0.59
HOXA9-201ENST00000343483 TYW5A2RUC4 315 aaKnown RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 GSC2O15499 205 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 PEX11AO75192 247 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 CXCL14O95715 111 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 CKMP06732 381 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 GRK2P25098 689 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 GLRBP48167 497 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 SLC12A2P55011 1212 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 FSCBQ5H9T9 825 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 GAREM2Q75VX8 874 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 WDR75Q8IWA0 830 aaKnown RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 GPR65Q8IYL9 337 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 HS6ST3Q8IZP7 471 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 PNPLA1Q8N8W4 532 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 KCTD4Q8WVF5 259 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 MRPS31Q92665 395 aaKnown RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 NDNQ99608 321 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 SIKE1Q9BRV8 207 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 DENND2DQ9H6A0 471 aaPredicted RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 SCUBE2Q9NQ36 999 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 ACOT9Q9Y305 439 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 ASB3Q9Y575 518 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 TRIOBPQ9H2D6 2365 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 OR51F1A6NGY5 319 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 CAPN14A8MX76 684 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 G3V2L1 256 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 INSIG1O15503 277 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 SLC7A4O43246 635 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 GREM1O60565 184 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 SNAP91O60641 907 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 NDST3O95803 873 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 LATS1O95835 1130 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 OLFM2O95897 454 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 ATP5BP06576 529 aaKnown RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 LINC00271P0C7V0 271 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 GM2AP17900 193 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 POLD2P49005 469 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 CYTH1Q15438 398 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 ZNF789Q5FWF6 425 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 HJURPQ8NCD3 748 aaPredicted RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 PIWIL2Q8TC59 973 aaKnown RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 PPP4R1Q8TF05 950 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 TMA16Q96EY4 203 aaKnown RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 SCYL1Q96KG9 808 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 C1QTNF1Q9BXJ1 281 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 RNPEPL1Q9HAU8 725 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 RUVBL2Q9Y230 463 aaKnown RBP18.7■□□□□ 0.58
HOXA9-201ENST00000343483 C15orf41Q9Y2V0 281 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 MIA3Q5JRA6 1907 aa18.7■□□□□ 0.58
HOXA9-201ENST00000343483 TK2O00142 265 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 FGBP02675 491 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 ENO1P06733 434 aaKnown RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 C8AP07357 584 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 MZF1P28698 734 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 ALDH18A1P54886 795 aaKnown RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 TAS2R39P59534 338 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 ARF5P84085 180 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 CDH18Q13634 790 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 PTPRCAPQ14761 206 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 RBM20Q5T481 1227 aaKnown RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 LDB1Q86U70 411 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 TREML1Q86YW5 311 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 CILP2Q8IUL8 1156 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 SPATA6LQ8N4H0 392 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 MCUR1Q96AQ8 359 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 RMDN1Q96DB5 314 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 DNAJC1Q96KC8 554 aaKnown RBP18.69■□□□□ 0.58
HOXA9-201ENST00000343483 NSMCE3Q96MG7 304 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 TRIB3Q96RU7 358 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 EBF4Q9BQW3 602 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 MFSD1Q9H3U5 465 aa18.69■□□□□ 0.58
HOXA9-201ENST00000343483 SUDS3Q9H7L9 328 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms