RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 OAFQ86UD1 273 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ZCCHC9Q8N567 271 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 JPH3Q8WXH2 748 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 FATE1Q969F0 183 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CLPTM1LQ96KA5 538 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 LRRC40Q9H9A6 602 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NECTIN3Q9NQS3 549 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CHST12Q9NRB3 414 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ZNF518AQ6AHZ1 1483 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 RNF17Q9BXT8 1623 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 CIAO1O76071 339 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 GLI1P08151 1106 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ITGA2BP08514 1039 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SNRPFP62306 86 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 STILQ15468 1287 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 WSCD2Q2TBF2 565 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PLEKHG4Q58EX7 1191 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 DNAJC14Q6Y2X3 702 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 MFSD2AQ8NA29 543 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SCGB3A2Q96PL1 93 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 CLPBQ9H078 707 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 CXorf21Q9HAI6 301 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 TUBG2Q9NRH3 451 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 KCND1Q9NSA2 647 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 AGPAT5Q9NUQ2 364 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 USP17L12C9JPN9 530 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 USP17L21D6R901 530 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PLA2G6O60733 806 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ITGAVP06756 1048 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 RPA3P35244 121 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 RPL26P61254 145 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 TCP10Q12799 353 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 MTAPQ13126 283 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SLC13A2Q13183 592 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 MKRN4PQ13434 485 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 DNASE1L3Q13609 305 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 CARTPTQ16568 116 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 LDLRAP1Q5SW96 308 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 CYB5RLQ6IPT4 315 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF767PQ75MW2 155 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 MCOLN3Q8TDD5 553 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ATG4AQ8WYN0 398 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 C16orf58Q96GQ5 468 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF570Q96NI8 536 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF214Q9UL59 606 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 MTF2Q9Y483 593 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 PCDHGC5Q9Y5F6 944 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 OAS3Q9Y6K5 1087 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 PTPRDP23468 1912 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PRMT5O14744 637 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 MRASO14807 208 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PENKP01210 267 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 AZGP1P25311 298 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 ACSL1P33121 698 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 RPL3P39023 403 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF81P51508 661 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 GLRA4Q5JXX5 417 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PIK3R6Q5UE93 754 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ADNP2Q6IQ32 1131 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 BORAQ6PGQ7 559 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 BPIFB1Q8TDL5 484 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF431Q8TF32 576 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 SLC41A3Q96GZ6 507 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF649Q9BS31 505 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 WDR6Q9NNW5 1121 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 NRKQ7Z2Y5 1582 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 TAF1P21675 1872 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PIGBOS1A0A0B4J2F0 54 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 C12orf71A8MTZ7 269 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 MED24O75448 989 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 TGDSO95455 350 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 RLN2P04090 185 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SNRPB2P08579 225 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 ALDH1B1P30837 517 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 MAGEA3P43357 314 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 COTL1Q14019 142 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 UBAP2LQ14157 1087 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF438Q7Z4V0 828 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 OR2T34Q8NGX1 318 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 OR2T3Q8NH03 318 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 TRPM4Q8TD43 1214 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 GPR63Q9BZJ6 419 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 S100A14Q9HCY8 104 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PTBP2Q9UKA9 531 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 AGAP1Q9UPQ3 857 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ACOT9Q9Y305 439 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 LAMB2P55268 1798 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 POLR1CO15160 346 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 UGT2B17O75795 530 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 OXSR1O95747 527 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 AP2A1O95782 977 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 MGAT5Q09328 741 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 CTC1Q2NKJ3 1217 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 DCAF15Q66K64 600 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 AUTS2Q8WXX7 1259 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PIGKQ92643 395 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 NODALQ96S42 347 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 GAL3ST1Q99999 423 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PCDH9Q9HC56 1237 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 HOXC10Q9NYD6 342 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms