RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 LOC100506127A0A0U1RQW1 187 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 SCN2BO60939 215 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 SERPINB7O75635 380 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 TNFSF9P41273 254 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 DGCR6Q14129 220 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 RBFAQ8N0V3 343 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 OR4A15Q8NGL6 344 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 ZNF607Q96SK3 696 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 GRM6O15303 877 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 FARP2O94887 1054 aaPredicted RBP15.3■□□□□ 0.04
COL11A2-201ENST00000341947 CALCAP01258 141 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 NAGLUP54802 743 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 LGALS3BPQ08380 585 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 CDYL2Q8N8U2 506 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 OR4L1Q8NH43 312 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 PIWIL2Q8TC59 973 aaKnown RBP15.3■□□□□ 0.04
COL11A2-201ENST00000341947 MKL1Q969V6 931 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 ITCHQ96J02 903 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 NOL6Q9H6R4 1146 aaKnown RBP15.3■□□□□ 0.04
COL11A2-201ENST00000341947 KCNE2Q9Y6J6 123 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 A0A087X0B3 334 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 GOT1P17174 413 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 MC4RP32245 332 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 MRPS5P82675 430 aaKnown RBP15.3■□□□□ 0.04
COL11A2-201ENST00000341947 PLPP4Q5VZY2 271 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 KCNK18Q7Z418 384 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 TEX47Q8TBZ9 253 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 KCTD4Q8WVF5 259 aa15.3■□□□□ 0.04
COL11A2-201ENST00000341947 NEDD8-MDP1E9PL57 170 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TLR5O60602 858 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 APODP05090 189 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 GABRR2P28476 465 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 GRM5P41594 1212 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 SRP54P61011 504 aaKnown RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 SPIBQ01892 262 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 BNC1Q01954 994 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 SRSF11Q05519 484 aaKnown RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBX2Q13207 712 aaPredicted RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 ZDHHC20Q5W0Z9 365 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TMEM161BQ8NDZ6 487 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 MYO19Q96H55 970 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 AGXT2Q9BYV1 514 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 SPAG4Q9NPE6 437 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3DA0A087WVF3 549 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3IA0A087WXS9 549 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3EA0A087X179 549 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3KA0A087X1G2 549 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3FA6NER0 549 aaPredicted RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3LB9A6J9 549 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 FGF1P05230 155 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3HP0C7X1 549 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 GRIA3P42263 894 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 NR1D2Q14995 579 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3GQ6DHY5 549 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3CQ6IPX1 549 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TRIM40Q6P9F5 258 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TBC1D3Q8IZP1 549 aaPredicted RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 AENQ8WTP8 325 aaKnown RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TRIM63Q969Q1 353 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 LINGO1Q96FE5 620 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TAS2R14Q9NYV8 317 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 ABCA9Q8IUA7 1624 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 ITGAVP06756 1048 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 USP46P62068 366 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 ALKBH2Q6NS38 261 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 RAVER1Q8IY67 606 aaKnown RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 EXOC2Q96KP1 924 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 GRIP2Q9C0E4 1043 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 CDK18Q07002 472 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 AADACL2Q6P093 401 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 FAM151BQ6UXP7 276 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 COPS8Q99627 209 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 COMMD9Q9P000 198 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 ADAMTS13Q76LX8 1427 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 SLC28A2O43868 658 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 ZNF37AP17032 561 aaPredicted RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 RPL22P35268 128 aaKnown RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 BUD31P41223 144 aaPredicted RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 MAXP61244 160 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 NOGQ13253 232 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 TTC23Q5W5X9 447 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 PHF13Q86YI8 300 aaPredicted RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 PHYKPLQ8IUZ5 450 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 BPIFB6Q8NFQ5 453 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 CLIC5Q9NZA1 410 aa15.29■□□□□ 0.04
COL11A2-201ENST00000341947 ZNF214Q9UL59 606 aaPredicted RBP15.29■□□□□ 0.04
COL11A2-201ENST00000341947 MFN2O95140 757 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 COX4I1P13073 169 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 MYL9P24844 172 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 NRF1Q16656 503 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 SNAP47Q5SQN1 464 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 GPR180Q86V85 440 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 DNAJB14Q8TBM8 379 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 PTCD3Q96EY7 689 aaKnown RBP15.28■□□□□ 0.04
COL11A2-201ENST00000341947 CNPPD1Q9BV87 410 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 UBE2QL1A1L167 161 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 OR10H3O60404 316 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 UGT1A5P35504 534 aa15.28■□□□□ 0.04
COL11A2-201ENST00000341947 FAM35AQ86V20 835 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms