RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 TTC1Q99614 292 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 SLC2A4RGQ9NR83 387 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 LATS2Q9NRM7 1088 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 APPL1Q9UKG1 709 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 INTS6Q9UL03 887 aaKnown RBP7.22□□□□□ -1.25
NUP43-201ENST00000340413 RPS6KL1Q9Y6S9 549 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 AGAP14A8MT82 685 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 CBX4O00257 560 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 LDB2O43679 373 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 AP1G1O43747 822 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 TSPAN3O60637 253 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 ZNF821O75541 412 aaPredicted RBP7.22□□□□□ -1.25
NUP43-201ENST00000340413 LPOP22079 712 aaPredicted RBP7.22□□□□□ -1.25
NUP43-201ENST00000340413 HLA-FP30511 346 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 SERPINB5P36952 375 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 PFKPQ01813 784 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 ITIH4Q14624 930 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 QPCTQ16769 361 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 FSCBQ5H9T9 825 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 LY6G5CQ5SRR4 150 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 ZNF697Q5TEC3 545 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 MRNIPQ6NTE8 343 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 VITQ6UXI7 678 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 CYP2U1Q7Z449 544 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 RASSF3Q86WH2 238 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 RALGPS2Q86X27 583 aaPredicted RBP7.22□□□□□ -1.25
NUP43-201ENST00000340413 IPMKQ8NFU5 416 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 PIH1D2Q8WWB5 315 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.22□□□□□ -1.25
NUP43-201ENST00000340413 GRAMD1AQ96CP6 724 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 GAS2L1Q99501 681 aaPredicted RBP7.22□□□□□ -1.25
NUP43-201ENST00000340413 HEPHQ9BQS7 1158 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 SIKE1Q9BRV8 207 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 THAP10Q9P2Z0 257 aaPredicted RBP7.22□□□□□ -1.25
NUP43-201ENST00000340413 CCL26Q9Y258 94 aa7.22□□□□□ -1.25
NUP43-201ENST00000340413 TRBV5-4A0A0C4DH59 114 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 KLHL33A6NCF5 533 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 FAM47DPA6NHR8 397 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 ANKRD66B4E2M5 251 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 QSOX1O00391 747 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 TYROBPO43914 113 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 GLRA3O75311 464 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 CD70P32970 193 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 HMGCLP35914 325 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 MDH1P40925 334 aaKnown RBP7.21□□□□□ -1.25
NUP43-201ENST00000340413 MAPK9P45984 424 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 NEK3P51956 506 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 ST8SIA6P61647 398 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 IRX1P78414 480 aaPredicted RBP7.21□□□□□ -1.25
NUP43-201ENST00000340413 KBTBD12Q3ZCT8 623 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 LEXMQ3ZCV2 418 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 CCDC153Q494R4 210 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 TTC23LQ6PF05 361 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 EXOC3L1Q86VI1 746 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 CIR1Q86X95 450 aaPredicted RBP7.21□□□□□ -1.25
NUP43-201ENST00000340413 TMEM25Q86YD3 366 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 BANPQ8N9N5 519 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 DENND1AQ8TEH3 1009 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 ARL8AQ96BM9 186 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 PPP1R16AQ96I34 528 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 ZSWIM3Q96MP5 696 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 SPON2Q9BUD6 331 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 HDAC8Q9BY41 377 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 VPS11Q9H270 941 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 CHRDQ9H2X0 955 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 NOD2Q9HC29 1040 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 HPS4Q9NQG7 708 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 ZFATQ9P243 1243 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 DEC1Q9P2X7 70 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 PCDHB1Q9Y5F3 818 aa7.21□□□□□ -1.25
NUP43-201ENST00000340413 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.21□□□□□ -1.25
NUP43-201ENST00000340413 TCF20Q9UGU0 1960 aaKnown RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 A0A0J9YYE9 177 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 MUSKO15146 869 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 PRLP01236 227 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 TRBC1P01850 177 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 DHRS4L1P0CG22 281 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 SSTR1P30872 391 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 RBM10P98175 930 aaKnown RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 ZBTB16Q05516 673 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 ZKSCAN8Q15776 578 aaPredicted RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 CDKN3Q16667 212 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 FBXO43Q4G163 708 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 FAM45BPQ6NSW5 357 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 METTL2BQ6P1Q9 378 aaKnown RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 TPRG1Q6ZUI0 275 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 USP45Q70EL2 814 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 DPPA4Q7L190 304 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 SDCCAG8Q86SQ7 713 aaPredicted RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 SYNPOQ8N3V7 929 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 FAM45AQ8TCE6 357 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 EPS8L3Q8TE67 593 aaKnown RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 ZNF669Q96BR6 464 aaPredicted RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 CFAP36Q96G28 342 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 PLCD4Q9BRC7 762 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 ATXN2Q99700 1313 aaKnown RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 APODP05090 189 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 RECQLP46063 649 aaPredicted RBP7.21□□□□□ -1.26
NUP43-201ENST00000340413 ASPHQ12797 758 aa7.21□□□□□ -1.26
NUP43-201ENST00000340413 TMEM52BQ4KMG9 183 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms