RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 FGL2Q14314 439 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 NOMO1Q15155 1222 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 TEAD4Q15561 434 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 NAPEPLDQ6IQ20 393 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 ADAT2Q7Z6V5 191 aaKnown RBP15.36■□□□□ 0.05
UBE3B-201ENST00000340074 ACTL9Q8TC94 416 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 AGAP3Q96P47 875 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 WRAP53Q9BUR4 548 aaKnown RBP15.36■□□□□ 0.05
UBE3B-201ENST00000340074 SLC17A9Q9BYT1 436 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 FZD3Q9NPG1 666 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 CA5BQ9Y2D0 317 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 PCDHB9Q9Y5E1 797 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 RAI2Q9Y5P3 530 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 PRAMEF26H0Y7S4 382 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 MMP20O60882 483 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 PAK4O96013 591 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-201ENST00000340074 WNT1P04628 370 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 CD38P28907 300 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 ATXN3P54252 364 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-201ENST00000340074 FAM193AP78312 1265 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 OTUD4Q01804 1114 aaKnown RBP15.35■□□□□ 0.05
UBE3B-201ENST00000340074 XRCC4Q13426 336 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 RSPO4Q2I0M5 234 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-201ENST00000340074 TMEM52BQ4KMG9 183 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 STPG1Q5TH74 334 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 ERAP2Q6P179 960 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 TRIM58Q8NG06 486 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 OR2I1PQ8NGU4 316 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 NETO1Q8TDF5 533 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 CXorf40AQ8TE69 158 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 UBE2Q2Q8WVN8 375 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 QKIQ96PU8 341 aaKnown RBP eCLIP15.35■□□□□ 0.05
UBE3B-201ENST00000340074 FAM118BQ9BPY3 351 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 TMEM9BQ9NQ34 198 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 ANKRD6Q9Y2G4 727 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 CABIN1Q9Y6J0 2220 aa15.35■□□□□ 0.05
UBE3B-201ENST00000340074 A0A1W2PQ67 120 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 A0A1W2PR77 199 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 C4orf47A7E2U8 309 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 HACD1B0YJ81 288 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 H7C0C1 242 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 VILLO15195 856 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 TM7SF2O76062 418 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 PGLSO95336 258 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 CPP00450 1065 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 MMP2P08253 660 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 PDHA1P08559 390 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 HNRNPA2B1P22626 353 aaKnown RBP15.34■□□□□ 0.05
UBE3B-201ENST00000340074 PTPN3P26045 913 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 MMP12P39900 470 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 CD86P42081 329 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 ATP5OP48047 213 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 LIMK1P53667 647 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 WASHC5Q12768 1159 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 RALGDSQ12967 914 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 SGCGQ13326 291 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 STAT4Q14765 748 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 RPS6KA1Q15418 735 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 KIF19Q2TAC6 998 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 TEX44Q53QW1 395 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 SLC45A4Q5BKX6 768 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 ARMC12Q5T9G4 340 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 ZSCAN30Q86W11 494 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 REXO1L1PQ8IX06 675 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 MINDY1Q8N5J2 469 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 TMEM145Q8NBT3 493 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 SPOCK2Q92563 424 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 C1QTNF2Q9BXJ5 285 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 ZDHHC5Q9C0B5 715 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 C10orf88Q9H8K7 445 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 CDV3Q9UKY7 258 aaKnown RBP15.34■□□□□ 0.05
UBE3B-201ENST00000340074 PHTF1Q9UMS5 762 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 SNX11Q9Y5W9 270 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 A8MX80 341 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 RAD51BO15315 384 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 AKT2P31751 481 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 LIG3P49916 1009 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 C21orf59P57076 290 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 CLDN2P57739 230 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 EIF3EP60228 445 aaKnown RBP15.34■□□□□ 0.05
UBE3B-201ENST00000340074 KLF1Q13351 362 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-201ENST00000340074 MFSD2AQ8NA29 543 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 PIH1D2Q8WWB5 315 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 HTR3CQ8WXA8 447 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 RMDN1Q96DB5 314 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 TEKT5Q96M29 485 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 RBM15Q96T37 977 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBE3B-201ENST00000340074 KLF6Q99612 283 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-201ENST00000340074 TDRD1Q9BXT4 1180 aaKnown RBP15.34■□□□□ 0.05
UBE3B-201ENST00000340074 CHKBQ9Y259 395 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 COQ6Q9Y2Z9 468 aa15.34■□□□□ 0.05
UBE3B-201ENST00000340074 TCRBV7S2A1N4TA0A589 114 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 GOLGA6L9A6NEM1 432 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 H0Y8X5 98 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 TLR4O00206 839 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 ZSCAN12O43309 604 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 MTSS1O43312 755 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 FZD6O60353 706 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 RBP3P10745 1247 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms