RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
OTOF-203ENST00000339598 FBXO10Q9UK96 956 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 LRRIQ1Q96JM4 1722 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 ADGRB2O60241 1585 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 RPL9P32969 192 aaKnown RBP12.55□□□□□ -0.4
OTOF-203ENST00000339598 HNF4AP41235 474 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 MAPK8P45983 427 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 BRCC3P46736 316 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 CSNK2BP67870 215 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 MRPS6P82932 125 aaKnown RBP12.55□□□□□ -0.4
OTOF-203ENST00000339598 SMAD3P84022 425 aaKnown RBP12.55□□□□□ -0.4
OTOF-203ENST00000339598 SLC20A2Q08357 652 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 KIAA0408Q6ZU52 694 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 SUSD6Q92537 303 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 ERLEC1Q96DZ1 483 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 VPS35Q96QK1 796 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 NPAS2Q99743 824 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 NLNQ9BYT8 704 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 PCDH12Q9NPG4 1184 aa12.55□□□□□ -0.4
OTOF-203ENST00000339598 CST1P01037 141 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 MPSTP25325 297 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CDKN2BP42772 138 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 PPM1LQ5SGD2 360 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 PERM1Q5SV97 790 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 SWT1Q5T5J6 900 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 ZNF549Q6P9A3 640 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 RBM44Q6ZP01 1051 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 OR4L1Q8NH43 312 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 MAGEC3Q8TD91 643 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 ANKRD49Q8WVL7 239 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 OSBPL11Q9BXB4 747 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 TTYH3Q9C0H2 523 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 EPB41L1Q9H4G0 881 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 ATP13A3Q9H7F0 1226 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 TMEM39AQ9NV64 488 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 LYVE1Q9Y5Y7 322 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 AK5Q9Y6K8 562 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 SF3B1O75533 1304 aaKnown RBP eCLIP12.54□□□□□ -0.4
OTOF-203ENST00000339598 SNPHO15079 494 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 FARP2O94887 1054 aaPredicted RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 FGF1P05230 155 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 UMPSP11172 480 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CDC42P60953 191 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 TOP3AQ13472 1001 aaPredicted RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 GALNT3Q14435 633 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 INSCQ1MX18 579 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CCDC157Q569K6 752 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CROCCP3Q8IVE0 287 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 ZC3H7AQ8IWR0 971 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 WDR60Q8WVS4 1066 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 USP7Q93009 1102 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 C19orf60Q96EN9 201 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 REXO5Q96IC2 774 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 PANX1Q96RD7 426 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 OSBPL6Q9BZF3 934 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 GOLGA2P5Q9HBQ8 144 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 PNPLA3Q9NST1 481 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 HBS1LQ9Y450 684 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 RIPK3Q9Y572 518 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 MYPNQ86TC9 1320 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 TBC1D3BA6NDS4 549 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 SGTAO43765 313 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 GUCY1B2O75343 617 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 SEC24AO95486 1093 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CD52P31358 61 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 ROR2Q01974 943 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 PTSQ03393 145 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 BNIP1Q12981 228 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 DLG2Q15700 870 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 FNDC3BQ53EP0 1204 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 NOMO2Q5JPE7 1267 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 GPR107Q5VW38 600 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 PTF1AQ7RTS3 328 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 MON1AQ86VX9 555 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 ZNF540Q8NDQ6 660 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 GPR156Q8NFN8 814 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 LINGO1Q96FE5 620 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 OLFM1Q99784 485 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 AGO1Q9UL18 857 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 GSTK1Q9Y2Q3 226 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 COMMD3-BMI1R4GMX3 469 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CNTRLQ7Z7A1 2325 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 C4BPAP04003 597 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 DBTP11182 482 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 IDO1P14902 403 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CTPS1P17812 591 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 EPORP19235 508 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CRHR1P34998 444 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 IL12RB1P42701 662 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 LPCAT4Q643R3 524 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 KLHL17Q6TDP4 642 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 MOB2Q70IA6 237 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 EIF3MQ7L2H7 374 aaKnown RBP12.54□□□□□ -0.4
OTOF-203ENST00000339598 CUZD1Q86UP6 607 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 HPS6Q86YV9 775 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CACTIN-AS1Q8N1I8 211 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 FAM47BQ8NA70 645 aa12.54□□□□□ -0.4
OTOF-203ENST00000339598 CLPTM1LQ96KA5 538 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms