RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ING2Q9H160 280 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PPCSQ9HAB8 311 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 SPATA31A6Q5VVP1 1343 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 LOC102724428A0A0B4J2F2 783 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 TRIM38O00635 465 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 TLL1O43897 1013 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 KRT37O76014 449 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 HLA-DRAP01903 254 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 HTR1AP08908 422 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 BTF3P20290 206 aaKnown RBP9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 CD68P34810 354 aaPredicted RBP9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 GP2P55259 537 aaKnown RBP9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 SIK1P57059 783 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 EVA1CP58658 441 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 PSMC5P62195 406 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 SLC12A1Q13621 1099 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 CA9Q16790 459 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 PPM1JQ5JR12 505 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 TBCELQ5QJ74 424 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF544Q6NX49 715 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 FOXR2Q6PJQ5 311 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 LIPIQ6XZB0 460 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 LINC00523Q86TU6 105 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM83AQ86UY5 434 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 METTL23Q86XA0 190 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 TBC1D21Q8IYX1 336 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 CHAC2Q8WUX2 184 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 ASB12Q8WXK4 309 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 SEPT8Q92599 483 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 HAS1Q92839 578 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 NRBF2Q96F24 287 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 HDHD5Q9BXW7 423 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 CD274Q9NZQ7 290 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 EGFL7Q9UHF1 273 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 PCOLCE2Q9UKZ9 415 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 TMPRSS11EQ9UL52 423 aa9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.71□□□□□ -0.85
PTCHD4-201ENST00000339488 NFASCO94856 1347 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 RGSL1A5PLK6 1076 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 C16orf96A6NNT2 1141 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 RGS5O15539 181 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 MPSTP25325 297 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 OXTRP30559 389 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 RPL22P35268 128 aaKnown RBP9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 PRIM2P49643 509 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 RFTN1Q14699 578 aaPredicted RBP9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 C5orf22Q49AR2 442 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 CYBRD1Q53TN4 286 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 AGMOQ6ZNB7 445 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 ANKS3Q6ZW76 656 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 PPIL6Q8IXY8 311 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 DHRSXQ8N5I4 330 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 NAT8LQ8N9F0 302 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 PJA1Q8NG27 643 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 RHOXF1Q8NHV9 184 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 GTF3C2Q8WUA4 911 aaPredicted RBP9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 TTC9Q92623 222 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 PPP1R2P1Q96PQ5 205 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 GDF15Q99988 308 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.71□□□□□ -0.862e-12■□□□□ 10.9
PTCHD4-201ENST00000339488 DDX4Q9NQI0 724 aaKnown RBP9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 SH3GLB2Q9NR46 395 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 TRMT13Q9NUP7 481 aaKnown RBP9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 POLR3BQ9NW08 1133 aaPredicted RBP9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 TAF1LQ8IZX4 1826 aa9.71□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC12A8A0AV02 714 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF98A6NK75 572 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 E5RI56 91 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 PDXKO00764 312 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 VNN1O95497 513 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 CHRNGP07510 517 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 SNRPA1P09661 255 aaKnown RBP9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 AGXTP21549 392 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 KELP23276 732 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 NDST1P52848 882 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 SNAP25P60880 206 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 PSME3P61289 254 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 BCL7AQ4VC05 210 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 CORO6Q6QEF8 472 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 NAPRTQ6XQN6 538 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 LMO3Q8TAP4 145 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 ASB9Q96DX5 294 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 DYNLL2Q96FJ2 89 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 KREMEN1Q96MU8 473 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 PIGSQ96S52 555 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 TUBA1CQ9BQE3 449 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 C1QTNF6Q9BXI9 259 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 RAB34Q9BZG1 259 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 SNX15Q9NRS6 342 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 DICER1Q9UPY3 1922 aaKnown RBP9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 RAB19A4D1S5 217 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 OR6C70A6NIJ9 312 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 PLD2O14939 933 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 HSPA4LO95757 839 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 CFBP00751 764 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 GLAP06280 429 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 PROS1P07225 676 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 CAPGP40121 348 aa9.7□□□□□ -0.86
PTCHD4-201ENST00000339488 HARS2P49590 506 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms