RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TMLHEQ9NVH6 421 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 GPR75-ASB3A0A0A6YYF3 556 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 XKRYO14609 159 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 NKRFO15226 690 aaKnown RBP eCLIP11.83□□□□□ -0.528e-7■■■□□ 18.4
SHANK2-201ENST00000338508 SIN3BO75182 1162 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 RPL21P46778 160 aaKnown RBP11.83□□□□□ -0.52
SHANK2-201ENST00000338508 SLC7A2P52569 658 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 SLC6A3Q01959 620 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.83□□□□□ -0.52
SHANK2-201ENST00000338508 C12orf56Q8IXR9 622 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 DNASE1L2Q92874 299 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 ERGIC2Q96RQ1 377 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 EGFL7Q9UHF1 273 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 NFASCO94856 1347 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 BANF1O75531 89 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 S100A6P06703 90 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 MNDAP41218 407 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 ALDH5A1P51649 535 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-201ENST00000338508 SLC12A3P55017 1021 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 C9orf64Q5T6V5 341 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 SLC30A6Q6NXT4 461 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 NEK5Q6P3R8 708 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 SNX20Q7Z614 316 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 SLC4A11Q8NBS3 891 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 CACNB4O00305 520 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-201ENST00000338508 SLC9A3R1O14745 358 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-201ENST00000338508 GCATO75600 419 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 INMTO95050 263 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 FOXM1Q08050 763 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 MSLNQ13421 630 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-201ENST00000338508 IL18R1Q13478 541 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 CBX2Q14781 532 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-201ENST00000338508 FBXO33Q7Z6M2 555 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 NAXEQ8NCW5 288 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 METTL21AQ8WXB1 218 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 APOPT1Q96IL0 206 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 SLC24A2Q9UI40 661 aa11.83□□□□□ -0.52
SHANK2-201ENST00000338508 TPST2O60704 377 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 SLC6A2P23975 617 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ADARP55265 1226 aaKnown RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 TMPRSS11BQ86T26 416 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 TMPRSS6Q8IU80 811 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 UBR7Q8N806 425 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ZNF75CPQ92670 426 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 TRAPPC9Q96Q05 1148 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 PLGRKTQ9HBL7 147 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 BTBD7Q9P203 1132 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 DHRS7Q9Y394 339 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 IRAK3Q9Y616 596 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ATP6AP2A0A1C7CYW4 349 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ZSCAN5CA6NGD5 496 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 MANSC4A6NHS7 340 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 HAT1O14929 419 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ATP6AP2O75787 350 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 GNRH1P01148 92 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 FTH1P02794 183 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 SREBF1P36956 1147 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 NR1D2Q14995 579 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 SLC15A2Q16348 729 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 METTL21CQ5VZV1 264 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 RP9Q8TA86 221 aaKnown RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 PIH1D2Q8WWB5 315 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 GAL3ST4Q96RP7 486 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 SAMHD1Q9Y3Z3 626 aaKnown RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 TIMM8BQ9Y5J9 83 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 CASZ1Q86V15 1759 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 CPSF1Q10570 1443 aaKnown RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 DDTLA6NHG4 134 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 GDI2P50395 445 aaKnown RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ARFIP1P53367 373 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 CBX3Q13185 183 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 FRRS1Q6ZNA5 592 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 KCT2Q8NC54 265 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 TPK1Q9H3S4 243 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 PLEKHA1Q9HB21 404 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 SIRPGQ9P1W8 387 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 RPS6KA6Q9UK32 745 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 E7ENQ6 273 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 PGRMC2O15173 223 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 SEC24AO95486 1093 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 IFI35P80217 286 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 NDUFA13Q9P0J0 144 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 CHP2O43745 196 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 RECQL5O94762 991 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ACLYP53396 1101 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 CORO7P57737 925 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 BHLHB9Q6PI77 547 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ZNF730Q6ZMV8 503 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 GHDCQ8N2G8 530 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 STAG3L4Q8TBR4 150 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 UBE2E3Q969T4 207 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 WRAP53Q9BUR4 548 aaKnown RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 FAM192AQ9GZU8 254 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 ACSS2Q9NR19 701 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 CD84Q9UIB8 345 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 EPHB6O15197 1021 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 CCNB1P14635 433 aa11.82□□□□□ -0.52
SHANK2-201ENST00000338508 PECAM1P16284 738 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-201ENST00000338508 HSF2Q03933 536 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms