RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PPP1R10Q96QC0 940 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 OXCT2Q9BYC2 517 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CAAP1Q9H8G2 361 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 KRT36O76013 467 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MC4RP32245 332 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 BOP1Q14137 746 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MCOLN3Q8TDD5 553 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 B3GALT6Q96L58 329 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 TYROBPO43914 113 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MGRN1O60291 552 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 KDM1AO60341 852 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CAPN15O75808 1086 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 COL6A1P12109 1028 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 TTPAP49638 278 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 SLC10A7Q0GE19 358 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 KIAA0930Q6ICG6 404 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FAM126BQ8IXS8 530 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 OR6K2Q8NGY2 324 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 KBTBD7Q8WVZ9 684 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 TXLNGYQ9BZA5 131 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FAM72CH0Y354 149 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 AOC2O75106 756 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PARNO95453 639 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CXCL14O95715 111 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 RPL17P18621 184 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 LAG3P18627 525 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 HSPA13P48723 471 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MAPKAPK2P49137 400 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FAM72AQ5TYM5 149 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FAM72DQ6L9T8 149 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 SZRD1Q7Z422 152 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 ADCK2Q7Z695 626 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FAM72BQ86X60 149 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FBXO22Q8NEZ5 403 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 OSCP1Q8WVF1 389 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 SQORQ9Y6N5 450 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 ABLIM1O14639 778 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CD3EAPO15446 510 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 IRF5Q13568 498 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 HECTD2Q5U5R9 776 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 LRRC74BQ6ZQY2 392 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CAND1Q86VP6 1230 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FNDC5Q8NAU1 212 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 RIN3Q8TB24 985 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 ADAM7Q9H2U9 754 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 OPTCQ9UBM4 332 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 DNAJB4Q9UDY4 337 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MSH3P20585 1137 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 PPP3CCP48454 512 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 KRT72Q14CN4 511 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 FBXL22Q6P050 247 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ERAP2Q6P179 960 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 AFTPHQ6ULP2 937 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 EFCAB3Q8N7B9 438 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GSTCDQ8NEC7 633 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 CNDP1Q96KN2 507 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TMEM209Q96SK2 561 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZDHHC6Q9H6R6 413 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 RPP40O75818 363 aaKnown RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 NDST3O95803 873 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZCCHC18P0CG32 403 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 MAD2L1Q13257 205 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZBTB6Q15916 424 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TTC7BQ86TV6 843 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 CIR1Q86X95 450 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 MAB21L3Q8N8X9 362 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 BRSK1Q8TDC3 778 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 C10orf82Q8WW14 230 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TLR6Q9Y2C9 796 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 CTPS1P17812 591 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 MRPS22P82650 360 aaKnown RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TBCELQ5QJ74 424 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 LINGO4Q6UY18 593 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GPSM1Q86YR5 675 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 RCN3Q96D15 328 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ARHGAP39Q9C0H5 1083 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 SLC10A3P09131 477 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 HGFP14210 728 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF33AQ06730 810 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 CRY1Q16526 586 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 GPR158Q5T848 1215 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 NET1Q7Z628 596 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 OR6Y1Q8NGX8 325 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 SEZ6LQ9BYH1 1024 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ARIH1Q9Y4X5 557 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TNPO3Q9Y5L0 923 aaKnown RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 TOGARAM1Q9Y4F4 1720 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ARHGAP10A1A4S6 786 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 C9IYK1 514 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ATXN8OSP0DMR3 200 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 IFNA8P32881 189 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF781Q8N8C0 355 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 STYXQ8WUJ0 223 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ANKRD27Q96NW4 1050 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 KLHL4Q9C0H6 718 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 RMND5AQ9H871 391 aa6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF395Q9H8N7 513 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.32□□□□□ -1.4
PRKDC-202ENST00000338368 ZMYM5Q9UJ78 669 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms