RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 HNRNPLP14866 589 aaKnown RBP eCLIP5.39□□□□□ -1.556e-7■■■□□ 17.5
PRPF4B-201ENST00000337659 CORO1AP31146 461 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 HMGCLP35914 325 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CCR2P41597 374 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 RAP1GDS1P52306 607 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 TWF1Q12792 350 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 PEX6Q13608 980 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 POLD3Q15054 466 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 UGT3A2Q3SY77 523 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 PPP6R3Q5H9R7 873 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 MARC1Q5VT66 337 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 FAM45BPQ6NSW5 357 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SCYL2Q6P3W7 929 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 EPGNQ6UW88 154 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SPATA21Q7Z572 469 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ADIPOR2Q86V24 386 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 PHYKPLQ8IUZ5 450 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 PCDH20Q8N6Y1 951 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 PPHLN1Q8NEY8 458 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 FAM45AQ8TCE6 357 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ZNF483Q8TF39 744 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CDKL2Q92772 493 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 FAM149B1Q96BN6 582 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 GDAP1L1Q96MZ0 367 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 THAP1Q9NVV9 213 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 BFARQ9NZS9 450 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 IL17CQ9P0M4 197 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 MTO1Q9Y2Z2 717 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 COL27A1Q8IZC6 1860 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 C2orf78A6NCI8 922 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 AHSGP02765 367 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CBSLP0DN79 551 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 HOXB9P17482 250 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CBSP35520 551 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 DNA2P51530 1060 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SULT2A1Q06520 285 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 IFFO1Q0D2I5 559 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 AP1B1Q10567 949 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 DLG1Q12959 904 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 FOXR1Q6PIV2 292 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 FIBCD1Q8N539 461 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SLC7A6OSQ96CW6 309 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 LINC00615Q96LM1 132 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ASB2Q96Q27 587 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ATOH8Q96SQ7 321 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 AARSD1Q9BTE6 412 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 MEAF6Q9HAF1 191 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SLC17A7Q9P2U7 560 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 EPS15L1Q9UBC2 864 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 INTS6Q9UL03 887 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 GINS2Q9Y248 185 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ZNF711Q9Y462 761 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 USH1CQ9Y6N9 552 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SLCO1B7G3V0H7 640 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 UGT1A9O60656 530 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ASLP04424 464 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SERPINE1P05121 402 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 HOXC4P09017 264 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ALDH3A1P30838 453 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 KCNQ1P51787 676 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CYHR1Q6ZMK1 362 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 OTOP3Q7RTS5 596 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 PALM2Q8IXS6 379 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 NRSN1Q8IZ57 195 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CMTM8Q8IZV2 173 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 DEFB123Q8N688 67 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 MDGA1Q8NFP4 955 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 MDM1Q8TC05 714 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 BCAS4Q8TDM0 211 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ACTRT2Q8TDY3 377 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 USP33Q8TEY7 942 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 TSPEARQ8WU66 669 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 EID2BQ96D98 161 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SCARF2Q96GP6 870 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 UGT1A7Q9HAW7 530 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 UGT1A10Q9HAW8 530 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 UGT1A8Q9HAW9 530 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SP110Q9HB58 689 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 TLR9Q9NR96 1032 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 TBC1D14Q9P2M4 693 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CHKBQ9Y259 395 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 VPS9D1Q9Y2B5 631 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 INPP5FQ9Y2H2 1132 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 AP1G1O43747 822 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 RPS17P08708 135 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ERGP11308 486 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 PAMP19021 973 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CPOXP36551 454 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 SLC1A2P43004 574 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 MAGEA9P43362 315 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 RAB10P61026 200 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 GKAP1Q5VSY0 366 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 TMEM207Q6UWW9 146 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ANKMY2Q8IV38 441 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 DCLK2Q8N568 766 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 CCDC197Q8NCU1 140 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 ADAM32Q8TC27 787 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 HASPINQ8TF76 798 aa5.39□□□□□ -1.55
PRPF4B-201ENST00000337659 KCNJ9Q92806 393 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms