RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 RASGRP1O95267 797 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 PIGNO95427 931 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 TNFP01375 233 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 ATP1A3P13637 1013 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 TSHRP16473 764 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 TGM2P21980 687 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 IGFALSP35858 605 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 CSNK1DP48730 415 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 LIG3P49916 1009 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 ERVPABLB-1P60509 514 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 TYRO3Q06418 890 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 BCL2L1Q07817 233 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 INPP5AQ14642 412 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 RFTN1Q14699 578 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 NCAPHQ15003 741 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 IRF4Q15306 451 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 PPP6R3Q5H9R7 873 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 TPRG1LQ5T0D9 272 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 C6orf132Q5T0Z8 1188 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 GUSBP11Q6P575 273 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 LVRNQ6Q4G3 990 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 RBM44Q6ZP01 1051 aaKnown RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 SRLQ86TD4 932 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 GKN2Q86XP6 184 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 CAMK1DQ8IU85 385 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 SDR16C5Q8N3Y7 309 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 FSTL5Q8N475 847 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 TP53I13Q8NBR0 393 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 NAF1Q96HR8 494 aaKnown RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 CELF6Q96J87 481 aaKnown RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 CINPQ9BW66 212 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 BOCQ9BWV1 1114 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 SLC39A8Q9C0K1 460 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 PRORYQ9H606 182 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 LRRC19Q9H756 370 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 SYNDIG1Q9H7V2 258 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 SP110Q9HB58 689 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 MRPL47Q9HD33 250 aaKnown RBP10.75□□□□□ -0.69
CAPN3-202ENST00000337571 PCDH12Q9NPG4 1184 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 THSD1Q9NS62 852 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 LHX3Q9UBR4 397 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 PADI4Q9UM07 663 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 COQ6Q9Y2Z9 468 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 RAI2Q9Y5P3 530 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 APC2O95996 2303 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 LY6G6EA0A0G2JKS1 128 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TMEM191CA6NGB0 347 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 LRRC53A6NM62 1247 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TK2O00142 265 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TEX33O43247 280 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TCEA3O75764 348 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 FTLP02792 175 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 GZMAP12544 262 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 C6P13671 934 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 RENBPP51606 427 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF135P52742 658 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 HK3P52790 923 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 UCNP55089 124 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 CXADRP78310 365 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 OGDHQ02218 1023 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 NSUN2Q08J23 767 aaKnown RBP eCLIP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 C19orf57Q0VDD7 668 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 NFATC4Q14934 902 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 C3orf38Q5JPI3 329 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 PLEKHA7Q6IQ23 1121 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 FOXR1Q6PIV2 292 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 CRTC1Q6UUV9 634 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 RFX8Q6ZV50 586 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 APTXQ7Z2E3 356 aaKnown RBP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 PSTKQ8IV42 348 aaKnown RBP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 ARL14Q8N4G2 192 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TSEN2Q8NCE0 465 aaKnown RBP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TSACCQ96A04 125 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 VOPP1Q96AW1 172 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TRIM11Q96F44 468 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 CCDC97Q96F63 343 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 APOOQ9BUR5 198 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 LRRC61Q9BV99 259 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 DPH1Q9BZG8 443 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 EDEM3Q9BZQ6 932 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TCEAL2Q9H3H9 227 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-202ENST00000337571 HAUS4Q9H6D7 363 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 ZWILCHQ9H900 591 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 GPATCH2LQ9NWQ4 482 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TAS2R14Q9NYV8 317 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 SATB2Q9UPW6 733 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 SCINQ9Y6U3 715 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 U3KQA8 63 aa10.74□□□□□ -0.69
CAPN3-202ENST00000337571 TEX51A0A1B0GUA7 166 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 TSPAN11A1L157 253 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 CFAP69A5D8W1 941 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 TMX2-CTNND1H3BSU7 103 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 CACNB4O00305 520 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-202ENST00000337571 KLK10O43240 276 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 BUB1BO60566 1050 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-202ENST00000337571 DXOO77932 396 aaKnown RBP10.73□□□□□ -0.69
CAPN3-202ENST00000337571 SERPINC1P01008 464 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 PCCBP05166 539 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 ERCC2P18074 760 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms