RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SLC2A7Q6PXP3 512 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 SLC22A9Q8IVM8 553 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 BRSK2Q8IWQ3 736 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 TBC1D21Q8IYX1 336 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 HDAC2Q92769 488 aaKnown RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 ASB9Q96DX5 294 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 ACOX2Q99424 681 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 PNPLA8Q9NP80 782 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 SOAT2O75908 522 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 BCAS2O75934 225 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 PGK2P07205 417 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 NFKB1P19838 968 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 ACO1P21399 889 aaKnown RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 KRT6CP48668 564 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 CLK2P49760 499 aaKnown RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 MS4A2Q01362 244 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 FCHO2Q0JRZ9 810 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 ZNF235Q14590 738 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 ZNF57Q68EA5 555 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 NEPROQ6NW34 567 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 EFL1Q7Z2Z2 1120 aaKnown RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 DEFB106AQ8N104 65 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 TTC39CQ8N584 583 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 TPD52L3Q96J77 140 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 TNIP3Q96KP6 325 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 COPS4Q9BT78 406 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 PSAT1Q9Y617 370 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 SLIT3O75094 1523 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 MYH1P12882 1939 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 G3V2T6 193 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 MTSS1O43312 755 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 ANXA9O76027 345 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 MTHFRP42898 656 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 PPM1FP49593 454 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 RHDQ02161 417 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 BNIP2Q12982 314 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 PPIL2Q13356 520 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 DDX39BQ13838 428 aaKnown RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 GCNT7Q6ZNI0 430 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 DCDC5Q6ZRR9 648 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 KBTBD6Q86V97 674 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 PSTKQ8IV42 348 aaKnown RBP13.31□□□□□ -0.28
COL2A1-201ENST00000337299 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 CPB2Q96IY4 423 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 YME1L1Q96TA2 773 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 AMBNQ9NP70 447 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 MORF4L1Q9UBU8 362 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 ANKRD6Q9Y2G4 727 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 CEPT1Q9Y6K0 416 aa13.31□□□□□ -0.28
COL2A1-201ENST00000337299 H0YC42 278 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ANGPTL1O95841 491 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 CES1P23141 567 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 NR4A2P43354 598 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 NR2C2P49116 596 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 TUBA4AP68366 448 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 INSCQ1MX18 579 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ARHGAP17Q68EM7 881 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 GLYATQ6IB77 296 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 RELL1Q8IUW5 271 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 FIBCD1Q8N539 461 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 PDPRQ8NCN5 879 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 LMO3Q8TAP4 145 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 MCOLN3Q8TDD5 553 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ASZ1Q8WWH4 475 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 EDEM1Q92611 657 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 KLK14Q9P0G3 267 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ZSCAN5BA6NJL1 495 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 STX7O15400 261 aaKnown RBP13.3□□□□□ -0.28
COL2A1-201ENST00000337299 TMCC2O75069 709 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ICAM1P05362 532 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 FGF3P11487 239 aaPredicted RBP13.3□□□□□ -0.28
COL2A1-201ENST00000337299 RAB10P61026 200 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 LIPEQ05469 1076 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 PCLAFQ15004 111 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 AHSA2Q719I0 299 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 RPS27LQ71UM5 84 aaKnown RBP13.3□□□□□ -0.28
COL2A1-201ENST00000337299 CCDC117Q8IWD4 279 aaPredicted RBP13.3□□□□□ -0.28
COL2A1-201ENST00000337299 FSTL5Q8N475 847 aaPredicted RBP13.3□□□□□ -0.28
COL2A1-201ENST00000337299 FBXO39Q8N4B4 442 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 HBEGFQ99075 208 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 WDCPQ9H6R7 721 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 RGS18Q9NS28 235 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 RBM22Q9NW64 420 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL2A1-201ENST00000337299 KLHL3Q9UH77 587 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 FAM50BQ9Y247 325 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 CCDC182A6NF36 153 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 PSMD3O43242 534 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 STAG3L1P0CL83 205 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ELK4P28324 431 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 GCAP28676 217 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 BACE1P56817 501 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 SPIRE1Q08AE8 756 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 NAB1Q13506 487 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ADHFE1Q8IWW8 467 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 SPPL2AQ8TCT8 520 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 GRIN3AQ8TCU5 1115 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 GPRASP2Q96D09 838 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms