RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CFAP157Q5JU67 520 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 TSTD2Q5T7W7 516 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 GPR158Q5T848 1215 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 SLC8B1Q6J4K2 584 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 KIRREL3Q8IZU9 778 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF461Q8TAF7 563 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 PIWIL2Q8TC59 973 aaKnown RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF558Q96NG5 402 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 OR52B2Q96RD2 323 aa12.67□□□□□ -0.38
LIMK1-201ENST00000336180 CINPQ9BW66 212 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-201ENST00000336180 FAM92AA1XBS5 289 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 INSIG1O15503 277 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 CACNG3O60359 315 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 PIGNO95427 931 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 PRAMEF12O95522 483 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 CKMP06732 381 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 CCDC166P0CW27 439 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 NDST2P52849 883 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 OXCT1P55809 520 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 SLC25A3Q00325 362 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 GPR22Q99680 433 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 ACOT9Q9Y305 439 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 CPQQ9Y646 472 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 A0A1W2PRU2 124 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 CCDC162PA2VCL2 907 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 DCXO43602 365 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TIMM44O43615 452 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 MGRN1O60291 552 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 DLX3O60479 287 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 GOT2P00505 430 aaKnown RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 RAG1P15918 1043 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 GABRR2P28476 465 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 KCNC1P48547 511 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 CDK18Q07002 472 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 ARL13AQ5H913 290 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 WDR75Q8IWA0 830 aaKnown RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 NSL1Q96IY1 281 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 SLC45A3Q96JT2 553 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 POLR1EQ9GZS1 481 aaKnown RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 ALG9Q9H6U8 611 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 COG4Q9H9E3 785 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 SARS2Q9NP81 518 aaKnown RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TNFRSF12AQ9NP84 129 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TREX1Q9NSU2 369 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 OLA1Q9NTK5 396 aaKnown RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 SPATS2LQ9NUQ6 558 aaKnown RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TAS2R1Q9NYW7 299 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 LMCD1Q9NZU5 365 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 IGLV3-10A0A075B6K4 115 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 MAGEB16A2A368 324 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 NCF1BA6NI72 391 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 NCF1CA8MVU1 366 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 HOXA2O43364 376 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 PRAMEF11O60813 436 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 IGLV3-27P01718 113 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 URODP06132 367 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 MYL4P12829 197 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 NCF1P14598 390 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 MSX2P35548 267 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 IDH3AP50213 366 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF177Q13360 481 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 ARHGEF6Q15052 776 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TMEM207Q6UWW9 146 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TMEM150AQ86TG1 271 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TDRD5Q8NAT2 981 aaKnown RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 PHC3Q8NDX5 983 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 ESAMQ96AP7 390 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 CCDC124Q96CT7 223 aaKnown RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 C7orf26Q96N11 449 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TSNARE1Q96NA8 513 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 C1QTNF1Q9BXJ1 281 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 TNKS2Q9H2K2 1166 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 DENND2DQ9H6A0 471 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-201ENST00000336180 GPAMQ9HCL2 828 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 GTSE1Q9NYZ3 720 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 VPS28Q9UK41 221 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 BLOC1S6Q9UL45 172 aa12.66□□□□□ -0.38
LIMK1-201ENST00000336180 ALPIP09923 528 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 ZDHHC11BP0C7U3 371 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 SERPINB5P36952 375 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.38
LIMK1-201ENST00000336180 CDH13P55290 713 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 RAB10P61026 200 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 CCDC15Q0P6D6 951 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 LRRC8EQ6NSJ5 796 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 OR4K2Q8NGD2 314 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 WDR60Q8WVS4 1066 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 APBB2Q92870 758 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 SPATA17Q96L03 361 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 ARPC5LQ9BPX5 153 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 CHCHD3Q9NX63 227 aaKnown RBP12.65□□□□□ -0.38
LIMK1-201ENST00000336180 CXXC1Q9P0U4 656 aaPredicted RBP12.65□□□□□ -0.38
LIMK1-201ENST00000336180 UBA2Q9UBT2 640 aaPredicted RBP12.65□□□□□ -0.38
LIMK1-201ENST00000336180 ZDHHC2Q9UIJ5 367 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 DRGXA6NNA5 263 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 IQCF5A8MTL0 148 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 CCL16O15467 120 aa12.65□□□□□ -0.38
LIMK1-201ENST00000336180 LDB2O43679 373 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms